Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LINC01616-201ENST00000561816 2280 ntBASIC6.6□□□□□ -1.35
EPHB3P54753 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.6□□□□□ -1.35
EPHB3P54753 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.59□□□□□ -1.35
EPHB3P54753 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 EIF3EP1-201ENST00000433978 1316 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 RNU4-4P-201ENST00000364588 130 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL136310.1-201ENST00000404926 654 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 RNU6ATAC25P-201ENST00000408798 117 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.59□□□□□ -1.35
EPHB3P54753 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.59□□□□□ -1.35
EPHB3P54753 ELOCP9-201ENST00000418624 239 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL353662.1-201ENST00000439099 327 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 VPS25P1-201ENST00000455691 508 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 RPL7P45-201ENST00000455851 743 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 RN7SL221P-201ENST00000466190 281 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.59□□□□□ -1.35
EPHB3P54753 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC026414.1-201ENST00000504046 698 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC6.59□□□□□ -1.35
EPHB3P54753 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 RN7SKP34-201ENST00000516142 244 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 TRIM77BP-201ENST00000524985 1119 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 PCNPP1-201ENST00000552501 511 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC009120.3-201ENST00000563335 499 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC090286.3-201ENST00000573133 187 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 MIR5095-201ENST00000578844 88 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.59□□□□□ -1.35
EPHB3P54753 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC073333.2-201ENST00000603589 769 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AL031601.1-201ENST00000605702 394 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AL021707.7-201ENST00000607991 416 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 U6atac.1-201ENST00000616025 117 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.59□□□□□ -1.35
EPHB3P54753 AC024884.1-201ENST00000620583 399 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 AC079248.2-201ENST00000623779 326 ntBASIC6.59□□□□□ -1.35
EPHB3P54753 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
EPHB3P54753 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
EPHB3P54753 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
EPHB3P54753 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
EPHB3P54753 AC007406.5-201ENST00000570140 3170 ntBASIC6.59□□□□□ -1.36
EPHB3P54753 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
EPHB3P54753 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
EPHB3P54753 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC092725.2-201ENST00000567658 1389 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 AL133243.2-201ENST00000610331 1621 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC105235.1-201ENST00000623208 1816 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 AC023490.2-201ENST00000359859 470 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 RNA5SP110-201ENST00000362638 115 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 RNA5SP478-201ENST00000364657 115 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
EPHB3P54753 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC092642.1-201ENST00000392417 425 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
EPHB3P54753 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
EPHB3P54753 Z68694.1-201ENST00000413929 841 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.58□□□□□ -1.36
EPHB3P54753 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC6.58□□□□□ -1.36
EPHB3P54753 AC019178.2-201ENST00000423595 505 ntBASIC6.58□□□□□ -1.36
EPHB3P54753 AC021876.1-201ENST00000425959 359 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms