Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMARCA4P51532 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
SMARCA4P51532 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC9.15□□□□□ -0.94
SMARCA4P51532 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMARCA4P51532 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
SMARCA4P51532 DNAJA1P3-201ENST00000399417 1194 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC9.15□□□□□ -0.94
SMARCA4P51532 NIP7P2-201ENST00000485801 544 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 RPS24P16-201ENST00000497294 392 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC9.15□□□□□ -0.94
SMARCA4P51532 AC009643.1-201ENST00000532030 391 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC9.15□□□□□ -0.94
SMARCA4P51532 MIR4277-201ENST00000578298 84 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 AC011626.1-201ENST00000604710 562 ntBASIC9.15□□□□□ -0.94
SMARCA4P51532 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.15□□□□□ -0.94
SMARCA4P51532 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMARCA4P51532 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
SMARCA4P51532 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SMARCA4P51532 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SMARCA4P51532 AC004158.1-201ENST00000564508 4319 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 MIR589-201ENST00000385238 99 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 EIF2S2P2-201ENST00000447161 982 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 AC010733.1-201ENST00000451515 401 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 RN7SL817P-201ENST00000480777 288 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 SEPT10P1-201ENST00000517342 1162 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 TOMM20P2-201ENST00000540082 421 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 BNIP3P35-201ENST00000604530 490 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 AL445423.1-201ENST00000609941 536 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 AL392048.1-201ENST00000613946 534 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 AC069542.2-201ENST00000624816 216 ntBASIC9.14□□□□□ -0.95
SMARCA4P51532 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC9.14□□□□□ -0.95
SMARCA4P51532 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.14□□□□□ -0.95
SMARCA4P51532 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
SMARCA4P51532 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SMARCA4P51532 AL592148.3-201ENST00000608771 2646 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SMARCA4P51532 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 U3.30-201ENST00000391308 210 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC9.13□□□□□ -0.95
SMARCA4P51532 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC9.13□□□□□ -0.95
SMARCA4P51532 SLC25A18P1-201ENST00000449385 454 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC9.13□□□□□ -0.95
SMARCA4P51532 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AC012339.2-201ENST00000523996 453 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SMARCA4P51532 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SMARCA4P51532 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SMARCA4P51532 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AC091046.3-201ENST00000631455 1574 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AC234779.1-201ENST00000425910 285 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC9.13□□□□□ -0.95
SMARCA4P51532 SOX5P1-201ENST00000524155 1127 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 AL110118.1-201ENST00000553543 400 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC9.13□□□□□ -0.95
SMARCA4P51532 AL139124.1-201ENST00000609123 421 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 AC068724.3-201ENST00000625906 87 ntBASIC9.13□□□□□ -0.95
SMARCA4P51532 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
SMARCA4P51532 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC9.12□□□□□ -0.95
SMARCA4P51532 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC9.12□□□□□ -0.95
SMARCA4P51532 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SMARCA4P51532 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SMARCA4P51532 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC9.12□□□□□ -0.95
SMARCA4P51532 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SMARCA4P51532 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SMARCA4P51532 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.12□□□□□ -0.95
SMARCA4P51532 GNG5P2-201ENST00000372054 207 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SMARCA4P51532 AF186996.5-201ENST00000418098 904 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 AC005154.2-201ENST00000438110 379 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC9.12□□□□□ -0.95
SMARCA4P51532 AC005412.2-201ENST00000492004 341 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 AC130364.2-201ENST00000528639 604 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 SCARNA9-201ENST00000530422 353 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 AL590392.1-201ENST00000604960 446 ntBASIC9.12□□□□□ -0.95
SMARCA4P51532 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SMARCA4P51532 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC9.12□□□□□ -0.95
SMARCA4P51532 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SMARCA4P51532 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC9.11□□□□□ -0.95
SMARCA4P51532 BRD7P6-201ENST00000431406 1860 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 MIR129-1-201ENST00000384972 72 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 Z97832.1-201ENST00000402490 328 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC9.11□□□□□ -0.95
SMARCA4P51532 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SMARCA4P51532 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC9.11□□□□□ -0.95
SMARCA4P51532 SS18L2P2-201ENST00000583960 235 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 AL121873.1-201ENST00000616013 524 ntBASIC9.11□□□□□ -0.95
SMARCA4P51532 AC011944.2-201ENST00000624440 683 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms