Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RPL12P43-201ENST00000420608 499 ntBASIC5.74□□□□□ -1.49
LHX1P48742 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 MYO5BP2-201ENST00000449815 1277 ntBASIC5.74□□□□□ -1.49
LHX1P48742 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 RPL7P40-201ENST00000481703 745 ntBASIC5.74□□□□□ -1.49
LHX1P48742 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.74□□□□□ -1.49
LHX1P48742 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.74□□□□□ -1.49
LHX1P48742 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.74□□□□□ -1.49
LHX1P48742 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.74□□□□□ -1.49
LHX1P48742 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.74□□□□□ -1.49
LHX1P48742 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LHX1P48742 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LHX1P48742 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.74□□□□□ -1.49
LHX1P48742 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 AC114774.1-201ENST00000507410 1770 ntBASIC5.73□□□□□ -1.49
LHX1P48742 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LHX1P48742 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LHX1P48742 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 RNU6-891P-201ENST00000384280 111 ntBASIC5.73□□□□□ -1.49
LHX1P48742 RNU6-171P-201ENST00000384354 107 ntBASIC5.73□□□□□ -1.49
LHX1P48742 RNU1-149P-201ENST00000390870 161 ntBASIC5.73□□□□□ -1.49
LHX1P48742 HSPA8P15-201ENST00000401676 786 ntBASIC5.73□□□□□ -1.49
LHX1P48742 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 NPM1P38-201ENST00000403835 865 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.73□□□□□ -1.49
LHX1P48742 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX1P48742 AC108075.1-201ENST00000424692 529 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 OR52B5P-201ENST00000435337 951 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX1P48742 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.73□□□□□ -1.49
LHX1P48742 RPL7P6-201ENST00000480903 738 ntBASIC5.73□□□□□ -1.49
LHX1P48742 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.73□□□□□ -1.49
LHX1P48742 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.73□□□□□ -1.49
LHX1P48742 RNU6-941P-201ENST00000516346 108 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC136777.2-201ENST00000522979 358 ntBASIC5.73□□□□□ -1.49
LHX1P48742 OR11H3P-201ENST00000554547 982 ntBASIC5.73□□□□□ -1.49
LHX1P48742 RPL10P14-201ENST00000565265 298 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX1P48742 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.73□□□□□ -1.49
LHX1P48742 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX1P48742 OR7E18P-201ENST00000592589 702 ntBASIC5.73□□□□□ -1.49
LHX1P48742 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 AP000769.2-201ENST00000602344 396 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX1P48742 BNIP3P7-201ENST00000605641 516 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC117490.2-201ENST00000610042 594 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC135068.5-201ENST00000624197 983 ntBASIC5.73□□□□□ -1.49
LHX1P48742 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 OR52B5P-202ENST00000641118 1110 ntBASIC5.73□□□□□ -1.49
LHX1P48742 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.73□□□□□ -1.49
LHX1P48742 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 OR55B1P-203ENST00000641518 2602 ntBASIC5.73□□□□□ -1.49
LHX1P48742 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LHX1P48742 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX1P48742 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 AC015799.1-201ENST00000622996 3122 ntBASIC5.72□□□□□ -1.49
LHX1P48742 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 AL078621.3-201ENST00000623707 2042 ntBASIC5.72□□□□□ -1.49
LHX1P48742 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LHX1P48742 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 RN7SKP185-201ENST00000362813 326 ntBASIC5.72□□□□□ -1.49
LHX1P48742 NANOGP4-201ENST00000427230 913 ntBASIC5.72□□□□□ -1.49
LHX1P48742 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 NDUFB4P8-201ENST00000435351 367 ntBASIC5.72□□□□□ -1.49
LHX1P48742 CNOT7P2-201ENST00000441051 832 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms