Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT6CP48668 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT6CP48668 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.36□□□□□ -1.55
KRT6CP48668 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
KRT6CP48668 AC008079.2-201ENST00000623543 20396 ntBASIC5.36□□□□□ -1.55
KRT6CP48668 AC083843.2-201ENST00000568248 6253 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 AC021242.1-201ENST00000507315 2035 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 OR7E25P-201ENST00000344844 931 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 RNU1-146P-201ENST00000364015 165 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 RN7SKP275-201ENST00000364626 301 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 RN7SKP187-201ENST00000365536 330 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.35□□□□□ -1.55
KRT6CP48668 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
KRT6CP48668 RN7SKP286-201ENST00000410894 299 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC066692.1-201ENST00000421721 457 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC007161.1-204ENST00000423039 460 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC113412.1-201ENST00000425840 504 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC127526.2-201ENST00000426436 775 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 NPM1P22-201ENST00000427761 952 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.35□□□□□ -1.55
KRT6CP48668 AP006222.1-205ENST00000450734 457 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 RNU6-615P-201ENST00000516065 106 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 RNA5SP271-201ENST00000516700 88 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.35□□□□□ -1.55
KRT6CP48668 MRPS16P1-201ENST00000523462 412 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 TRIM77BP-201ENST00000524985 1119 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT6CP48668 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
KRT6CP48668 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT6CP48668 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT6CP48668 AP001496.3-201ENST00000580230 913 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC233702.9-201ENST00000581528 203 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 OR7M1P-201ENST00000608946 533 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 MIR6780B-201ENST00000610307 79 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AC010632.3-201ENST00000611377 369 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.35□□□□□ -1.55
KRT6CP48668 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
KRT6CP48668 AC133552.1-201ENST00000569988 4007 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 AC006206.1-201ENST00000544842 3387 ntBASIC5.35□□□□□ -1.55
KRT6CP48668 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
KRT6CP48668 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.34□□□□□ -1.55
KRT6CP48668 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 SYT14P1-202ENST00000600441 1448 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.34□□□□□ -1.55
KRT6CP48668 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
KRT6CP48668 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 MIR551A-201ENST00000385042 96 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 RPSAP35-201ENST00000413753 818 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 RN7SL168P-201ENST00000463821 279 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 RPS23P6-201ENST00000466136 431 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.34□□□□□ -1.55
KRT6CP48668 RN7SL649P-201ENST00000496974 275 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC021106.1-201ENST00000509020 1058 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 AC091912.1-201ENST00000511351 248 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 SEPT10P1-201ENST00000517342 1162 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.34□□□□□ -1.55
KRT6CP48668 AC079600.1-201ENST00000550326 297 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 DPPA2P4-201ENST00000563717 878 ntBASIC5.34□□□□□ -1.55
KRT6CP48668 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
KRT6CP48668 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.34□□□□□ -1.55
KRT6CP48668 MIR4271-201ENST00000582451 67 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms