Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.54□□□□□ -1.52
HTTP42858 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.54□□□□□ -1.52
HTTP42858 AC098976.1-201ENST00000513014 541 ntBASIC5.54□□□□□ -1.52
HTTP42858 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HTTP42858 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC5.54□□□□□ -1.52
HTTP42858 AL731566.1-201ENST00000620490 1937 ntBASIC5.53□□□□□ -1.52
HTTP42858 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HTTP42858 SNORD46.1-201ENST00000364139 104 ntBASIC5.53□□□□□ -1.52
HTTP42858 RNU6-761P-201ENST00000384148 107 ntBASIC5.53□□□□□ -1.52
HTTP42858 RCC2P2-201ENST00000422174 918 ntBASIC5.53□□□□□ -1.52
HTTP42858 SLC25A18P1-201ENST00000449385 454 ntBASIC5.53□□□□□ -1.52
HTTP42858 AC104971.1-201ENST00000495117 578 ntBASIC5.53□□□□□ -1.52
HTTP42858 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 AL592148.3-201ENST00000608771 2646 ntBASIC5.53□□□□□ -1.52
HTTP42858 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HTTP42858 AMZ2P2-201ENST00000406819 1057 ntBASIC5.53□□□□□ -1.52
HTTP42858 RPS3AP25-201ENST00000411660 793 ntBASIC5.53□□□□□ -1.52
HTTP42858 AL161722.2-201ENST00000434731 981 ntBASIC5.53□□□□□ -1.52
HTTP42858 AC114755.5-201ENST00000447760 831 ntBASIC5.53□□□□□ -1.52
HTTP42858 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 NPM1P6-201ENST00000521088 871 ntBASIC5.53□□□□□ -1.52
HTTP42858 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.53□□□□□ -1.52
HTTP42858 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.53□□□□□ -1.52
HTTP42858 ECM1P2-201ENST00000503354 1577 ntBASIC5.53□□□□□ -1.52
HTTP42858 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HTTP42858 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HTTP42858 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 RPL11P3-201ENST00000395256 523 ntBASIC5.52□□□□□ -1.53
HTTP42858 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.52□□□□□ -1.53
HTTP42858 AC097523.2-201ENST00000435551 652 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC108463.1-201ENST00000450258 347 ntBASIC5.52□□□□□ -1.53
HTTP42858 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC130364.2-201ENST00000528639 604 ntBASIC5.52□□□□□ -1.53
HTTP42858 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC007497.1-201ENST00000610421 561 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC039056.2-201ENST00000622261 511 ntBASIC5.52□□□□□ -1.53
HTTP42858 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.52□□□□□ -1.53
HTTP42858 MIR589-201ENST00000385238 99 ntBASIC5.52□□□□□ -1.53
HTTP42858 AL136116.2-201ENST00000404020 785 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC007016.1-201ENST00000512110 244 ntBASIC5.52□□□□□ -1.53
HTTP42858 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 AC099676.1-201ENST00000608886 657 ntBASIC5.52□□□□□ -1.53
HTTP42858 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC5.52□□□□□ -1.53
HTTP42858 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.52□□□□□ -1.53
HTTP42858 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 SNORA2.3-201ENST00000383920 135 ntBASIC5.52□□□□□ -1.53
HTTP42858 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.52□□□□□ -1.53
HTTP42858 RPS3AP54-201ENST00000435535 734 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC000111.2-201ENST00000448200 210 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.52□□□□□ -1.53
HTTP42858 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HTTP42858 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 AL627171.1-201ENST00000618845 1308 ntBASIC5.52□□□□□ -1.53
HTTP42858 RBPJP2-201ENST00000618187 1444 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC120338.1-201ENST00000625074 1541 ntBASIC5.52□□□□□ -1.53
HTTP42858 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HTTP42858 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC5.51□□□□□ -1.53
HTTP42858 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HTTP42858 AL442639.1-201ENST00000625030 1899 ntBASIC5.51□□□□□ -1.53
HTTP42858 MIR659-201ENST00000384963 97 ntBASIC5.51□□□□□ -1.53
HTTP42858 AL691482.1-201ENST00000453255 87 ntBASIC5.51□□□□□ -1.53
HTTP42858 AC083899.1-201ENST00000454465 3819 ntBASIC5.51□□□□□ -1.53
HTTP42858 RPS5P7-201ENST00000456664 608 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms