Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU12-2P-201ENST00000364789 156 ntBASIC7.75□□□□□ -1.17
RFX1P22670 SUGT1P1-201ENST00000379514 476 ntBASIC7.75□□□□□ -1.17
RFX1P22670 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RFX1P22670 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 MIR191-201ENST00000384873 92 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC006511.2-201ENST00000388966 660 ntBASIC7.75□□□□□ -1.17
RFX1P22670 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RFX1P22670 OR6C69P-201ENST00000394268 893 ntBASIC7.75□□□□□ -1.17
RFX1P22670 NCSTNP1-201ENST00000406229 144 ntBASIC7.75□□□□□ -1.17
RFX1P22670 RNA5SP177-201ENST00000410122 107 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AL450992.3-201ENST00000413192 568 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 FNDC3CP-201ENST00000420795 1155 ntBASIC7.75□□□□□ -1.17
RFX1P22670 RPL7P4-203ENST00000430239 730 ntBASIC7.75□□□□□ -1.17
RFX1P22670 MTND4P25-201ENST00000441039 533 ntBASIC7.75□□□□□ -1.17
RFX1P22670 RBMX2P4-201ENST00000441256 376 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC079781.1-201ENST00000441505 394 ntBASIC7.75□□□□□ -1.17
RFX1P22670 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.75□□□□□ -1.17
RFX1P22670 COX6CP12-201ENST00000446748 202 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 PRDX1P1-201ENST00000449329 596 ntBASIC7.75□□□□□ -1.17
RFX1P22670 RBMY2TP-201ENST00000451162 947 ntBASIC7.75□□□□□ -1.17
RFX1P22670 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.75□□□□□ -1.17
RFX1P22670 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 SNRPCP11-201ENST00000492453 205 ntBASIC7.75□□□□□ -1.17
RFX1P22670 RN7SL775P-201ENST00000498361 336 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.75□□□□□ -1.17
RFX1P22670 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 HMGB1P44-201ENST00000508597 572 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC048346.1-201ENST00000510247 144 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.75□□□□□ -1.17
RFX1P22670 RN7SL667P-201ENST00000582817 298 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC020914.6-201ENST00000594327 272 ntBASIC7.75□□□□□ -1.17
RFX1P22670 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 AL078623.1-201ENST00000602702 907 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC108673.3-201ENST00000609183 335 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AL139123.1-201ENST00000612008 430 ntBASIC7.75□□□□□ -1.17
RFX1P22670 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.75□□□□□ -1.17
RFX1P22670 MKKS-204ENST00000639674 192 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AC099654.12-201ENST00000639868 649 ntBASIC7.75□□□□□ -1.17
RFX1P22670 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 AL590290.1-201ENST00000405336 380 ntBASIC7.74□□□□□ -1.17
RFX1P22670 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC7.74□□□□□ -1.17
RFX1P22670 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 HCG25-217ENST00000422366 702 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 ANXA2P2-201ENST00000435128 1020 ntBASIC7.74□□□□□ -1.17
RFX1P22670 PCBP2P1-201ENST00000437262 977 ntBASIC7.74□□□□□ -1.17
RFX1P22670 UBE2V1P5-201ENST00000440070 405 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
RFX1P22670 RPS7P5-201ENST00000441482 581 ntBASIC7.74□□□□□ -1.17
RFX1P22670 CEACAMP5-201ENST00000448037 961 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RFX1P22670 RN7SL152P-201ENST00000484176 298 ntBASIC7.74□□□□□ -1.17
RFX1P22670 PDCL3P4-201ENST00000489621 720 ntBASIC7.74□□□□□ -1.17
RFX1P22670 IGBP1P5-201ENST00000507524 1000 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.74□□□□□ -1.17
RFX1P22670 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC7.74□□□□□ -1.17
RFX1P22670 HMGB1P23-201ENST00000518743 568 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 AP001189.2-201ENST00000527320 189 ntBASIC7.74□□□□□ -1.17
RFX1P22670 OR8A2P-201ENST00000528631 952 ntBASIC7.74□□□□□ -1.17
RFX1P22670 AHI1-217ENST00000534469 680 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.74□□□□□ -1.17
RFX1P22670 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.74□□□□□ -1.17
RFX1P22670 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms