Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 Y_RNA.372-201ENST00000365599 102 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 SNORD65.1-201ENST00000390889 71 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 CCNG1P1-201ENST00000406783 885 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 RPL12P10-201ENST00000413498 498 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 MYB-206ENST00000420123 1051 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 CDC42P6-201ENST00000421246 576 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC134879.1-201ENST00000426062 394 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 MTCO1P54-201ENST00000430139 712 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 FTLP17-201ENST00000432567 525 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 AL604028.2-201ENST00000437848 788 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 CR391992.1-201ENST00000438601 394 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 OR52I1-201ENST00000450052 1050 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 RN7SL834P-201ENST00000461450 286 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC117395.1-201ENST00000487390 403 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC122718.2-201ENST00000505325 591 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.16□□□□□ -1.26
NFKB1P19838 MTHFD2P4-201ENST00000515074 1025 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC087808.1-201ENST00000520501 361 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.16□□□□□ -1.26
NFKB1P19838 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 VN1R79P-201ENST00000593540 513 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 EXOSC3P2-201ENST00000594464 497 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC004890.3-201ENST00000605566 1095 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC012557.1-201ENST00000607115 611 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC011472.4-201ENST00000615848 491 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC009159.1-201ENST00000618386 642 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 AC034229.6-201ENST00000623704 224 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 AL356585.10-201ENST00000641883 123 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
NFKB1P19838 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.16□□□□□ -1.26
NFKB1P19838 AP004289.1-201ENST00000436307 2205 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 MTCO1P23-201ENST00000415223 1526 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 ATP5BP1-201ENST00000411980 1574 ntBASIC7.16□□□□□ -1.26
NFKB1P19838 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NFKB1P19838 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
NFKB1P19838 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NFKB1P19838 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
NFKB1P19838 AC073342.2-201ENST00000595842 1800 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC7.15□□□□□ -1.26
NFKB1P19838 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
NFKB1P19838 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.15□□□□□ -1.26
NFKB1P19838 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
NFKB1P19838 AL021877.2-201ENST00000624442 10684 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
NFKB1P19838 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 RPL12P13-201ENST00000310055 497 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 RPL9P21-201ENST00000392269 505 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.15□□□□□ -1.26
NFKB1P19838 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC7.15□□□□□ -1.26
NFKB1P19838 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC7.15□□□□□ -1.26
NFKB1P19838 AC069154.1-201ENST00000432914 542 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 ANXA2P2-201ENST00000435128 1020 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 RPL14P5-201ENST00000436474 730 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 AC073614.1-201ENST00000438690 650 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NFKB1P19838 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.15□□□□□ -1.26
NFKB1P19838 AC005517.1-201ENST00000452091 489 ntBASIC7.15□□□□□ -1.26
NFKB1P19838 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NFKB1P19838 RPL5P15-201ENST00000475870 897 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms