Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MTCYBP33-201ENST00000575007 1130 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC110760.3-201ENST00000598794 467 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC068790.7-201ENST00000602347 528 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC080013.3-201ENST00000606839 578 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC015982.1-201ENST00000608113 465 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC022509.4-201ENST00000621404 572 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.59□□□□□ -1.19
ERCC3P19447 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.59□□□□□ -1.2
ERCC3P19447 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
ERCC3P19447 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
ERCC3P19447 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
ERCC3P19447 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.59□□□□□ -1.2
ERCC3P19447 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
ERCC3P19447 NSRP1P1-201ENST00000444067 1693 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.58□□□□□ -1.2
ERCC3P19447 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC7.58□□□□□ -1.2
ERCC3P19447 MTCO1P3-201ENST00000429327 192 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC037198.2-201ENST00000478845 733 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC090058.1-201ENST00000498788 435 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 AP000619.2-201ENST00000546014 969 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AC016144.1-201ENST00000548175 1087 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 NBEAP1-201ENST00000554452 979 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC7.58□□□□□ -1.2
ERCC3P19447 AL353726.1-201ENST00000614041 1000 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 AC092140.2-201ENST00000618027 521 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.58□□□□□ -1.2
ERCC3P19447 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 MFSD8-245ENST00000641743 948 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 PROS2P-201ENST00000474651 1951 ntBASIC7.58□□□□□ -1.2
ERCC3P19447 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
ERCC3P19447 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
ERCC3P19447 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
ERCC3P19447 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 IGKV7-3-201ENST00000357453 298 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 GCNT1P4-201ENST00000404096 329 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 MTND4P22-201ENST00000413116 1169 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
ERCC3P19447 AC027644.1-201ENST00000419595 298 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 MTND4P20-201ENST00000424125 869 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 AC090018.1-201ENST00000434369 367 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.57□□□□□ -1.2
ERCC3P19447 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.57□□□□□ -1.2
ERCC3P19447 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC7.57□□□□□ -1.2
ERCC3P19447 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 AL606490.1-201ENST00000452266 765 ntBASIC7.57□□□□□ -1.2
ERCC3P19447 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC7.57□□□□□ -1.2
ERCC3P19447 MRPL42P4-201ENST00000453267 443 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms