Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 HSFY8P-201ENST00000437934 318 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AL512605.1-202ENST00000441919 381 ntBASIC5.58□□□□□ -1.52
PCNAP12004 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 AL359955.2-201ENST00000445380 353 ntBASIC5.58□□□□□ -1.52
PCNAP12004 MEMO1P4-201ENST00000453590 386 ntBASIC5.58□□□□□ -1.52
PCNAP12004 HSFY5P-201ENST00000453726 309 ntBASIC5.58□□□□□ -1.52
PCNAP12004 RN7SL168P-201ENST00000463821 279 ntBASIC5.58□□□□□ -1.52
PCNAP12004 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
PCNAP12004 RN7SL170P-201ENST00000487098 295 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AC010468.3-201ENST00000508225 458 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AC105384.2-201ENST00000508433 640 ntBASIC5.58□□□□□ -1.52
PCNAP12004 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.58□□□□□ -1.52
PCNAP12004 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
PCNAP12004 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.58□□□□□ -1.52
PCNAP12004 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 AL163952.1-202ENST00000569625 600 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.58□□□□□ -1.52
PCNAP12004 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.58□□□□□ -1.52
PCNAP12004 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 AC026790.2-201ENST00000606282 430 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AL592494.3-201ENST00000609485 464 ntBASIC5.58□□□□□ -1.52
PCNAP12004 AC024884.1-201ENST00000620583 399 ntBASIC5.58□□□□□ -1.52
PCNAP12004 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PCNAP12004 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCNAP12004 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 AL356317.1-201ENST00000396110 1436 ntBASIC5.57□□□□□ -1.52
PCNAP12004 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.57□□□□□ -1.52
PCNAP12004 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 PDZK1P1-202ENST00000425209 1350 ntBASIC5.57□□□□□ -1.52
PCNAP12004 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 AC003985.2-201ENST00000562268 1669 ntBASIC5.57□□□□□ -1.52
PCNAP12004 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCNAP12004 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PCNAP12004 RN7SKP187-201ENST00000365536 330 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 RNA5SP91-201ENST00000390902 119 ntBASIC5.57□□□□□ -1.52
PCNAP12004 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 AL353692.2-201ENST00000407054 335 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL355143.1-201ENST00000407101 841 ntBASIC5.57□□□□□ -1.52
PCNAP12004 RNA5SP296-201ENST00000410523 111 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 MORF4L1P7-201ENST00000426038 703 ntBASIC5.57□□□□□ -1.52
PCNAP12004 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 ARAFP2-201ENST00000440565 559 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL158053.1-201ENST00000441503 453 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC007000.2-201ENST00000442564 487 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL157884.3-201ENST00000448273 1184 ntBASIC5.57□□□□□ -1.52
PCNAP12004 CCRL1P1-201ENST00000449542 1053 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 AC002553.2-201ENST00000453217 340 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.57□□□□□ -1.52
PCNAP12004 ACA64.1-201ENST00000459171 127 ntBASIC5.57□□□□□ -1.52
PCNAP12004 CABYRP1-201ENST00000465493 1045 ntBASIC5.57□□□□□ -1.52
PCNAP12004 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.57□□□□□ -1.52
PCNAP12004 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.57□□□□□ -1.52
PCNAP12004 AC092902.1-201ENST00000486999 259 ntBASIC5.57□□□□□ -1.52
PCNAP12004 LSM3P4-201ENST00000502948 309 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC093763.2-201ENST00000505334 1223 ntBASIC5.57□□□□□ -1.52
PCNAP12004 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 AC111000.6-201ENST00000514471 709 ntBASIC5.57□□□□□ -1.52
PCNAP12004 Y_RNA.667-201ENST00000516212 107 ntBASIC5.57□□□□□ -1.52
PCNAP12004 RNA5SP438-201ENST00000516561 112 ntBASIC5.57□□□□□ -1.52
PCNAP12004 HMGB1P46-201ENST00000520062 610 ntBASIC5.57□□□□□ -1.52
PCNAP12004 VTA1P2-201ENST00000520205 911 ntBASIC5.57□□□□□ -1.52
PCNAP12004 IGLV3-30-201ENST00000524362 298 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.57□□□□□ -1.52
PCNAP12004 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCNAP12004 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
PCNAP12004 AL390334.1-201ENST00000556395 450 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC091078.2-201ENST00000557145 559 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC084759.1-201ENST00000561168 290 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC005726.4-201ENST00000582858 458 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.57□□□□□ -1.52
PCNAP12004 ZNF92P2-201ENST00000600543 1059 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AC105148.1-201ENST00000604961 409 ntBASIC5.57□□□□□ -1.52
PCNAP12004 KATNBL1P5-201ENST00000605015 517 ntBASIC5.57□□□□□ -1.52
PCNAP12004 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms