Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
TOP2AP11388 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.98□□□□□ -0.97
TOP2AP11388 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
TOP2AP11388 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
TOP2AP11388 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 RPL18P10-201ENST00000425606 538 ntBASIC8.98□□□□□ -0.97
TOP2AP11388 AURKAPS2-201ENST00000454983 333 ntBASIC8.98□□□□□ -0.97
TOP2AP11388 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC8.98□□□□□ -0.97
TOP2AP11388 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC8.98□□□□□ -0.97
TOP2AP11388 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.98□□□□□ -0.97
TOP2AP11388 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.98□□□□□ -0.97
TOP2AP11388 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.98□□□□□ -0.97
TOP2AP11388 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC8.98□□□□□ -0.97
TOP2AP11388 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TOP2AP11388 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
TOP2AP11388 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
TOP2AP11388 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC8.98□□□□□ -0.97
TOP2AP11388 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC8.97□□□□□ -0.97
TOP2AP11388 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOP2AP11388 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC8.97□□□□□ -0.97
TOP2AP11388 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOP2AP11388 FAM3C2-201ENST00000312214 681 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TOP2AP11388 GLULP6-201ENST00000399502 913 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 RN7SL354P-201ENST00000469282 294 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 NDUFA5P9-201ENST00000472609 340 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.97□□□□□ -0.97
TOP2AP11388 AL512310.9-201ENST00000553311 948 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TOP2AP11388 AC020910.3-201ENST00000603701 874 ntBASIC8.97□□□□□ -0.97
TOP2AP11388 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
TOP2AP11388 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.97□□□□□ -0.97
TOP2AP11388 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TOP2AP11388 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
TOP2AP11388 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TOP2AP11388 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
TOP2AP11388 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.96□□□□□ -0.97
TOP2AP11388 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
TOP2AP11388 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.96□□□□□ -0.97
TOP2AP11388 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC8.96□□□□□ -0.97
TOP2AP11388 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC8.96□□□□□ -0.97
TOP2AP11388 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
TOP2AP11388 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.96□□□□□ -0.97
TOP2AP11388 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC8.96□□□□□ -0.97
TOP2AP11388 AC010632.3-201ENST00000611377 369 ntBASIC8.96□□□□□ -0.97
TOP2AP11388 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.96□□□□□ -0.97
TOP2AP11388 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
TOP2AP11388 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
TOP2AP11388 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.96□□□□□ -0.97
TOP2AP11388 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOP2AP11388 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOP2AP11388 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
TOP2AP11388 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TOP2AP11388 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.96□□□□□ -0.98
TOP2AP11388 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.96□□□□□ -0.98
TOP2AP11388 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.95□□□□□ -0.98
TOP2AP11388 RSU1P3-201ENST00000412878 835 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 BX510359.2-201ENST00000417920 305 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.95□□□□□ -0.98
TOP2AP11388 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
TOP2AP11388 RPS12P31-201ENST00000491419 398 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 AC034205.1-201ENST00000520621 638 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 AC010401.2-201ENST00000575137 4934 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 AC010928.1-201ENST00000592477 1447 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 AP001267.4-201ENST00000602598 545 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 AC019193.2-201ENST00000610012 634 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 SAMMSON-226ENST00000642089 1582 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
TOP2AP11388 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
TOP2AP11388 ATP6V0E1P2-201ENST00000441771 245 ntBASIC8.95□□□□□ -0.98
TOP2AP11388 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.95□□□□□ -0.98
TOP2AP11388 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC8.95□□□□□ -0.98
TOP2AP11388 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
TOP2AP11388 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC8.95□□□□□ -0.98
TOP2AP11388 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC8.95□□□□□ -0.98
TOP2AP11388 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms