Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL1P09341 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC244517.3-201ENST00000616254 1235 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.07□□□□□ -1.76
CXCL1P09341 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL1P09341 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 AL672167.1-203ENST00000641299 2975 ntBASIC4.07□□□□□ -1.76
CXCL1P09341 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CXCL1P09341 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.07□□□□□ -1.76
CXCL1P09341 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.07□□□□□ -1.76
CXCL1P09341 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 MTCO1P22-201ENST00000604619 1360 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 RN7SKP104-201ENST00000362605 328 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RNA5SP500-201ENST00000364486 119 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 YWHAZP6-201ENST00000399764 738 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RPS6P23-201ENST00000413224 722 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC013429.2-201ENST00000418798 781 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC124944.2-201ENST00000429866 1242 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RBMY2AP-201ENST00000445405 1157 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 RBMY2CP-201ENST00000448575 1157 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RBMY2DP-202ENST00000448881 1157 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AL591623.2-201ENST00000449978 222 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RBMY2BP-202ENST00000451071 1156 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AL356981.1-201ENST00000454879 684 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC004890.1-201ENST00000461005 181 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 RN7SL583P-201ENST00000475692 287 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 RPL23AP37-201ENST00000479658 549 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC009120.1-201ENST00000493458 473 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 AL158068.1-201ENST00000506116 616 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC138409.2-202ENST00000507274 458 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 PCNAP4-201ENST00000532690 730 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC007956.1-201ENST00000555623 542 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC006530.1-201ENST00000555980 571 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CXCL1P09341 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.06□□□□□ -1.76
CXCL1P09341 IMMP1LP1-201ENST00000605170 488 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC097505.1-201ENST00000610199 565 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC092266.1-201ENST00000610958 165 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC109583.2-201ENST00000617367 129 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 AC022919.1-201ENST00000624979 626 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
CXCL1P09341 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CXCL1P09341 AC022306.1-201ENST00000560489 1562 ntBASIC4.06□□□□□ -1.76
CXCL1P09341 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL1P09341 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CXCL1P09341 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 RNA5SP28-201ENST00000363841 119 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL1P09341 RN7SKP38-201ENST00000410782 309 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AC126120.1-201ENST00000431082 470 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 RPL12P17-201ENST00000432393 498 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 TMX2P1-201ENST00000436507 708 ntBASIC4.05□□□□□ -1.76
CXCL1P09341 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL1P09341 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL1P09341 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms