Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.83□□□□□ -1.48
VTNP04004 AC092647.2-201ENST00000452998 253 ntBASIC5.83□□□□□ -1.48
VTNP04004 GTF2F2P1-201ENST00000511083 675 ntBASIC5.83□□□□□ -1.48
VTNP04004 EIF3KP3-201ENST00000514461 639 ntBASIC5.83□□□□□ -1.48
VTNP04004 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 OR4A43P-201ENST00000532938 908 ntBASIC5.83□□□□□ -1.48
VTNP04004 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.83□□□□□ -1.48
VTNP04004 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
VTNP04004 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 AP001357.1-201ENST00000586304 1053 ntBASIC5.83□□□□□ -1.48
VTNP04004 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 AC244107.2-201ENST00000611773 76 ntBASIC5.83□□□□□ -1.48
VTNP04004 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 AP002799.1-201ENST00000623552 423 ntBASIC5.83□□□□□ -1.48
VTNP04004 AP000641.1-201ENST00000531988 1639 ntBASIC5.83□□□□□ -1.48
VTNP04004 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.83□□□□□ -1.48
VTNP04004 OFD1P17-201ENST00000437639 3018 ntBASIC5.83□□□□□ -1.48
VTNP04004 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VTNP04004 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
VTNP04004 AC092747.4-201ENST00000620519 1861 ntBASIC5.83□□□□□ -1.48
VTNP04004 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 AC100757.1-201ENST00000616872 1835 ntBASIC5.83□□□□□ -1.48
VTNP04004 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTNP04004 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.82□□□□□ -1.48
VTNP04004 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
VTNP04004 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.82□□□□□ -1.48
VTNP04004 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 HSPA8P18-201ENST00000439846 1928 ntBASIC5.82□□□□□ -1.48
VTNP04004 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.82□□□□□ -1.48
VTNP04004 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RNA5SP514-201ENST00000363717 111 ntBASIC5.82□□□□□ -1.48
VTNP04004 RNU4-4P-201ENST00000364588 130 ntBASIC5.82□□□□□ -1.48
VTNP04004 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 MIR600-201ENST00000385007 98 ntBASIC5.82□□□□□ -1.48
VTNP04004 TRAV35-201ENST00000390462 330 ntBASIC5.82□□□□□ -1.48
VTNP04004 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VTNP04004 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RPS20P25-201ENST00000412447 352 ntBASIC5.82□□□□□ -1.48
VTNP04004 EI24P4-201ENST00000423683 1078 ntBASIC5.82□□□□□ -1.48
VTNP04004 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.82□□□□□ -1.48
VTNP04004 RNU6-775P-201ENST00000459318 96 ntBASIC5.82□□□□□ -1.48
VTNP04004 PSAT1P4-201ENST00000466500 526 ntBASIC5.82□□□□□ -1.48
VTNP04004 RN7SL97P-201ENST00000486780 299 ntBASIC5.82□□□□□ -1.48
VTNP04004 AC231760.1-201ENST00000498002 260 ntBASIC5.82□□□□□ -1.48
VTNP04004 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.82□□□□□ -1.48
VTNP04004 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.82□□□□□ -1.48
VTNP04004 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 OR1F2P-201ENST00000570470 933 ntBASIC5.82□□□□□ -1.48
VTNP04004 MIR4436B2-201ENST00000581415 91 ntBASIC5.82□□□□□ -1.48
VTNP04004 MIR4436B1-201ENST00000583272 91 ntBASIC5.82□□□□□ -1.48
VTNP04004 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.82□□□□□ -1.48
VTNP04004 AC099494.2-201ENST00000623371 978 ntBASIC5.82□□□□□ -1.48
VTNP04004 AC099654.6-201ENST00000636487 512 ntBASIC5.82□□□□□ -1.48
VTNP04004 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.82□□□□□ -1.48
VTNP04004 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
VTNP04004 AC131971.1-201ENST00000332881 1482 ntBASIC5.82□□□□□ -1.48
VTNP04004 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTNP04004 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VTNP04004 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.81□□□□□ -1.48
VTNP04004 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.81□□□□□ -1.48
VTNP04004 CASC19-281ENST00000642118 1554 ntBASIC5.81□□□□□ -1.48
VTNP04004 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTNP04004 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VTNP04004 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.81□□□□□ -1.48
VTNP04004 AC092681.1-201ENST00000297369 291 ntBASIC5.81□□□□□ -1.48
VTNP04004 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTNP04004 U3.3-201ENST00000362986 216 ntBASIC5.81□□□□□ -1.48
VTNP04004 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTNP04004 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.81□□□□□ -1.48
VTNP04004 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms