Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC132825.1-201ENST00000463573 2247 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 RPS27AP7-201ENST00000422792 455 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 DSTNP5-201ENST00000427921 523 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 AL022319.1-201ENST00000458183 1167 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 RPL23AP72-201ENST00000492447 435 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 RN7SKP122-201ENST00000515923 296 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 RNA5SP143-201ENST00000516936 115 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC139697.1-201ENST00000548429 745 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC233699.1-201ENST00000569955 1168 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 AC020765.1-201ENST00000604296 328 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC005962.2-201ENST00000611427 652 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 TCL6_3.1-201ENST00000619064 137 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC008785.1-201ENST00000624475 456 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.92□□□□□ -1.62
SPTA1P02549 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 MAPK10-344ENST00000641718 3746 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 DBIP1-201ENST00000401435 260 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 RPS3AP23-201ENST00000401762 784 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC008280.1-201ENST00000418851 412 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC006065.1-201ENST00000422539 802 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.92□□□□□ -1.62
SPTA1P02549 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.92□□□□□ -1.62
SPTA1P02549 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC004980.4-201ENST00000513375 203 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.92□□□□□ -1.62
SPTA1P02549 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.92□□□□□ -1.62
SPTA1P02549 RN7SL356P-201ENST00000582228 248 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC112694.2-201ENST00000623697 768 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AL078621.3-201ENST00000623707 2042 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 AC009779.8-201ENST00000641684 4384 ntBASIC4.92□□□□□ -1.62
SPTA1P02549 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SPTA1P02549 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SPTA1P02549 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 AC104447.1-201ENST00000624214 2124 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SPTA1P02549 RNA5SP479-201ENST00000364858 117 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 RN7SKP100-201ENST00000411258 284 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 ATG4AP1-201ENST00000416893 538 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 HSPD1P12-201ENST00000429127 1069 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.91□□□□□ -1.62
SPTA1P02549 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.91□□□□□ -1.62
SPTA1P02549 AC092647.2-201ENST00000452998 253 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.91□□□□□ -1.62
SPTA1P02549 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.91□□□□□ -1.62
SPTA1P02549 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 GTF2IP11-201ENST00000526931 420 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AL049779.3-201ENST00000557141 606 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.91□□□□□ -1.62
SPTA1P02549 AL034374.2-201ENST00000605281 548 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 AP003789.1-201ENST00000617737 605 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 AC074141.1-201ENST00000588129 2995 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 AC130304.1-201ENST00000622942 2385 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AC005725.1-201ENST00000577346 2607 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SPTA1P02549 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SPTA1P02549 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SPTA1P02549 MT-RNR2-201ENST00000387347 1559 ntBASIC4.91□□□□□ -1.62
SPTA1P02549 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms