Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 U3.32-201ENST00000408116 212 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AF186996.5-201ENST00000418098 904 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 EIF2S2P3-201ENST00000428356 999 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 OR2B7P-201ENST00000429302 934 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.23□□□□□ -1.41
COL4A1P02462 RPS29P9-201ENST00000440360 171 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.23□□□□□ -1.41
COL4A1P02462 RPL23AP56-201ENST00000460778 453 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RPL12P20-201ENST00000475538 479 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RN7SL205P-201ENST00000490174 284 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RPS12P31-201ENST00000491419 398 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 C1GALT1P3-201ENST00000522049 819 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC012339.2-201ENST00000523996 453 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 OR5M2P-201ENST00000529003 936 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AC084824.2-201ENST00000548906 345 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 RN7SL52P-201ENST00000584271 284 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 AL161616.1-201ENST00000611867 286 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 MIR6780A-201ENST00000615089 68 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RN7SL722P-201ENST00000617780 284 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 RN7SL565P-201ENST00000618246 284 ntBASIC6.23□□□□□ -1.41
COL4A1P02462 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.23□□□□□ -1.41
COL4A1P02462 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL4A1P02462 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A1P02462 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A1P02462 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL4A1P02462 GLULP6-201ENST00000399502 913 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 RN7SL354P-201ENST00000469282 294 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 AP006289.1-201ENST00000538089 277 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A1P02462 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.22□□□□□ -1.41
COL4A1P02462 AC020910.3-201ENST00000603701 874 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 AL022401.1-201ENST00000619498 108 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 AC073869.10-201ENST00000642016 354 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.22□□□□□ -1.41
COL4A1P02462 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.22□□□□□ -1.41
COL4A1P02462 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL4A1P02462 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.22□□□□□ -1.41
COL4A1P02462 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A1P02462 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
COL4A1P02462 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
COL4A1P02462 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
COL4A1P02462 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A1P02462 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL4A1P02462 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A1P02462 AC068538.1-201ENST00000376856 336 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 U3.30-201ENST00000391308 210 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AC007559.1-201ENST00000428736 355 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A1P02462 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
COL4A1P02462 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A1P02462 RN7SKP67-201ENST00000515905 235 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 RN7SKP260-201ENST00000516907 149 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A1P02462 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.21□□□□□ -1.42
COL4A1P02462 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
COL4A1P02462 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.21□□□□□ -1.42
COL4A1P02462 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.21□□□□□ -1.42
COL4A1P02462 AC025857.2-201ENST00000602711 238 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AC083809.1-201ENST00000615051 472 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AL731566.2-201ENST00000618971 317 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AC105105.5-201ENST00000622635 1294 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
COL4A1P02462 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A1P02462 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A1P02462 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.21□□□□□ -1.42
COL4A1P02462 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
COL4A1P02462 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A1P02462 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A1P02462 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL4A1P02462 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.2□□□□□ -1.42
COL4A1P02462 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL4A1P02462 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms