Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNA5SP241-201ENST00000391326 114 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 HSPA8P15-201ENST00000401676 786 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 SNORA77-201ENST00000408716 125 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL3A1P02461 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.88□□□□□ -1.31
COL3A1P02461 HIGD1AP8-201ENST00000453927 274 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 AC114982.2-201ENST00000461396 358 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 NDUFB5P1-201ENST00000508134 564 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 AC040958.1-201ENST00000561102 201 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 CLIC4P2-201ENST00000601934 717 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 AC133644.2-201ENST00000608142 540 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 AC093799.2-201ENST00000610062 578 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.88□□□□□ -1.31
COL3A1P02461 AP002799.1-201ENST00000623552 423 ntBASIC6.88□□□□□ -1.31
COL3A1P02461 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
COL3A1P02461 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.88□□□□□ -1.31
COL3A1P02461 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL3A1P02461 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.88□□□□□ -1.31
COL3A1P02461 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.88□□□□□ -1.31
COL3A1P02461 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
COL3A1P02461 AC010401.2-201ENST00000575137 4934 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.87□□□□□ -1.31
COL3A1P02461 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
COL3A1P02461 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL3A1P02461 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.87□□□□□ -1.31
COL3A1P02461 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL3A1P02461 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.87□□□□□ -1.31
COL3A1P02461 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.87□□□□□ -1.31
COL3A1P02461 RPS27AP6-201ENST00000427962 448 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 NDUFA5P8-201ENST00000449019 346 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 RPL7P61-201ENST00000451721 751 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 AC004453.1-201ENST00000487895 408 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.87□□□□□ -1.31
COL3A1P02461 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 LDHBP3-201ENST00000514909 822 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.87□□□□□ -1.31
COL3A1P02461 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.87□□□□□ -1.31
COL3A1P02461 AP000676.2-201ENST00000529711 301 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.87□□□□□ -1.31
COL3A1P02461 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.87□□□□□ -1.31
COL3A1P02461 AC004908.3-201ENST00000610248 625 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 AC037198.3-201ENST00000616754 526 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
COL3A1P02461 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.87□□□□□ -1.31
COL3A1P02461 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
COL3A1P02461 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 CR383656.5-201ENST00000547616 1340 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 MRRFP1-201ENST00000435941 1675 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 Z95114.1-201ENST00000624264 14574 ntBASIC6.87□□□□□ -1.31
COL3A1P02461 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.87□□□□□ -1.31
COL3A1P02461 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL3A1P02461 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.87□□□□□ -1.31
COL3A1P02461 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
COL3A1P02461 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.87□□□□□ -1.31
COL3A1P02461 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.86□□□□□ -1.31
COL3A1P02461 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 RN7SKP153-201ENST00000365026 316 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 U3.32-201ENST00000408116 212 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 RN7SKP125-201ENST00000410481 302 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 MTND3P3-201ENST00000505004 126 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.86□□□□□ -1.31
COL3A1P02461 AC012400.1-201ENST00000518452 381 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AC022360.1-201ENST00000521058 340 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.86□□□□□ -1.31
COL3A1P02461 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL3A1P02461 OR1F2P-201ENST00000570470 933 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AC087783.2-201ENST00000605070 562 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AC092574.1-201ENST00000609771 420 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 MIR6748-201ENST00000610433 71 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 AC009163.6-201ENST00000612367 342 ntBASIC6.86□□□□□ -1.31
COL3A1P02461 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.86□□□□□ -1.31
COL3A1P02461 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.86□□□□□ -1.31
COL3A1P02461 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.86□□□□□ -1.31
COL3A1P02461 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL3A1P02461 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms