Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 REG1CP-206ENST00000447469 496 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 RN7SL814P-201ENST00000487715 300 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.17□□□□□ -1.42
COL2A1P02458 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.17□□□□□ -1.42
COL2A1P02458 RN7SKP260-201ENST00000516907 149 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.17□□□□□ -1.42
COL2A1P02458 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
COL2A1P02458 AL023583.1-201ENST00000607518 1143 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 AC073575.2-201ENST00000614212 627 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 AC099654.6-201ENST00000636487 512 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.17□□□□□ -1.42
COL2A1P02458 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
COL2A1P02458 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL2A1P02458 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.17□□□□□ -1.42
COL2A1P02458 AC006210.2-201ENST00000367074 1545 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL2A1P02458 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL2A1P02458 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 RPS4XP9-201ENST00000405151 780 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.16□□□□□ -1.42
COL2A1P02458 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.16□□□□□ -1.42
COL2A1P02458 AL161722.2-201ENST00000434731 981 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 RPL34P20-201ENST00000442771 351 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.16□□□□□ -1.42
COL2A1P02458 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.16□□□□□ -1.42
COL2A1P02458 RN7SL459P-201ENST00000481078 302 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 AC068587.1-201ENST00000483613 781 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.16□□□□□ -1.42
COL2A1P02458 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.16□□□□□ -1.42
COL2A1P02458 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.16□□□□□ -1.42
COL2A1P02458 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 MIR3934-201ENST00000579806 107 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 RNF138P2-201ENST00000603490 592 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 AC083809.1-201ENST00000615051 472 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 AC073365.1-203ENST00000641055 1992 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 AC079298.1-201ENST00000625026 1619 ntBASIC6.16□□□□□ -1.42
COL2A1P02458 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.16□□□□□ -1.42
COL2A1P02458 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL2A1P02458 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
COL2A1P02458 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 AC092681.1-201ENST00000297369 291 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
COL2A1P02458 RNA5SP123-201ENST00000363244 119 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 SNORA51.8-201ENST00000384234 132 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 MIR600-201ENST00000385007 98 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL2A1P02458 RPS16P5-201ENST00000406501 404 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.15□□□□□ -1.42
COL2A1P02458 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.15□□□□□ -1.42
COL2A1P02458 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.15□□□□□ -1.42
COL2A1P02458 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.15□□□□□ -1.42
COL2A1P02458 AC016712.1-201ENST00000431088 378 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 H3F3BP1-201ENST00000440551 403 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.15□□□□□ -1.42
COL2A1P02458 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.15□□□□□ -1.42
COL2A1P02458 AL161722.1-201ENST00000446972 1032 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 NOP56P2-201ENST00000447491 769 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 snoU13.29-201ENST00000459370 104 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 AC022360.1-201ENST00000521058 340 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 C1GALT1P3-201ENST00000522049 819 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 ADAM3B-201ENST00000569937 840 ntBASIC6.15□□□□□ -1.42
COL2A1P02458 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL2A1P02458 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL2A1P02458 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.15□□□□□ -1.42
COL2A1P02458 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL2A1P02458 AL353625.1-202ENST00000366273 571 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms