Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LDLRP01130 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 RN7SKP162-201ENST00000363605 345 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RNU6-670P-201ENST00000364312 104 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RNU1-136P-201ENST00000384181 164 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RNA5SP91-201ENST00000390902 119 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 AL096711.1-201ENST00000404780 554 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RN7SKP216-201ENST00000411050 312 ntBASIC5.49□□□□□ -1.53
LDLRP01130 DPPA2P3-201ENST00000411853 655 ntBASIC5.49□□□□□ -1.53
LDLRP01130 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.49□□□□□ -1.53
LDLRP01130 ARAFP1-201ENST00000422172 605 ntBASIC5.49□□□□□ -1.53
LDLRP01130 HSFY1P1-201ENST00000423928 1178 ntBASIC5.49□□□□□ -1.53
LDLRP01130 AC099677.3-201ENST00000427081 395 ntBASIC5.49□□□□□ -1.53
LDLRP01130 MGAT2P2-201ENST00000427194 797 ntBASIC5.49□□□□□ -1.53
LDLRP01130 AL590623.1-201ENST00000427864 105 ntBASIC5.49□□□□□ -1.53
LDLRP01130 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.49□□□□□ -1.53
LDLRP01130 AL136231.1-201ENST00000429407 730 ntBASIC5.49□□□□□ -1.53
LDLRP01130 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
LDLRP01130 MTND6P5-201ENST00000448266 512 ntBASIC5.49□□□□□ -1.53
LDLRP01130 RN7SL466P-201ENST00000497546 295 ntBASIC5.49□□□□□ -1.53
LDLRP01130 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.49□□□□□ -1.53
LDLRP01130 AC092593.2-201ENST00000513866 913 ntBASIC5.49□□□□□ -1.53
LDLRP01130 WBP1LP3-201ENST00000523033 208 ntBASIC5.49□□□□□ -1.53
LDLRP01130 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.49□□□□□ -1.53
LDLRP01130 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 AC010503.3-201ENST00000594355 540 ntBASIC5.49□□□□□ -1.53
LDLRP01130 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 MIR193BHG-214ENST00000641765 509 ntBASIC5.49□□□□□ -1.53
LDLRP01130 AP005435.3-201ENST00000531260 3198 ntBASIC5.49□□□□□ -1.53
LDLRP01130 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.49□□□□□ -1.53
LDLRP01130 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LDLRP01130 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 ABCC13-202ENST00000463099 3842 ntBASIC5.49□□□□□ -1.53
LDLRP01130 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.49□□□□□ -1.53
LDLRP01130 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LDLRP01130 AC002525.1-201ENST00000624392 1622 ntBASIC5.48□□□□□ -1.53
LDLRP01130 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC068870.3-201ENST00000625077 2536 ntBASIC5.48□□□□□ -1.53
LDLRP01130 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 MIR375-201ENST00000362103 64 ntBASIC5.48□□□□□ -1.53
LDLRP01130 U3.7-201ENST00000363668 216 ntBASIC5.48□□□□□ -1.53
LDLRP01130 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LDLRP01130 GPS2P1-201ENST00000411761 986 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 RPL35AP31-201ENST00000418340 337 ntBASIC5.48□□□□□ -1.53
LDLRP01130 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 RPL34P3-201ENST00000421454 338 ntBASIC5.48□□□□□ -1.53
LDLRP01130 OR10T1P-201ENST00000424327 947 ntBASIC5.48□□□□□ -1.53
LDLRP01130 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LDLRP01130 VN1R21P-201ENST00000426703 765 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AL392003.1-201ENST00000434394 243 ntBASIC5.48□□□□□ -1.53
LDLRP01130 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 TRIM60P16-201ENST00000444048 694 ntBASIC5.48□□□□□ -1.53
LDLRP01130 FTLP8-201ENST00000446770 267 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 AC016027.4-201ENST00000450866 277 ntBASIC5.48□□□□□ -1.53
LDLRP01130 SEPT7P3-201ENST00000455017 621 ntBASIC5.48□□□□□ -1.53
LDLRP01130 RNU1-88P-201ENST00000459274 128 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AC104849.1-201ENST00000462623 405 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AL122020.1-201ENST00000472287 459 ntBASIC5.48□□□□□ -1.53
LDLRP01130 NPM1P28-201ENST00000492269 840 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AC021269.1-201ENST00000526860 705 ntBASIC5.48□□□□□ -1.53
LDLRP01130 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.48□□□□□ -1.53
LDLRP01130 AC005000.1-201ENST00000536192 288 ntBASIC5.48□□□□□ -1.53
LDLRP01130 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.48□□□□□ -1.53
LDLRP01130 AC105148.1-201ENST00000604961 409 ntBASIC5.48□□□□□ -1.53
LDLRP01130 NANOGP3-201ENST00000605855 286 ntBASIC5.48□□□□□ -1.53
LDLRP01130 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.48□□□□□ -1.53
LDLRP01130 AC096861.1-201ENST00000616652 240 ntBASIC5.48□□□□□ -1.53
LDLRP01130 OR8G7P-201ENST00000616658 848 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms