Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 AC006539.1-201ENST00000481419 501 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC010374.1-201ENST00000503762 1237 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC021146.7-201ENST00000509604 775 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC5.96□□□□□ -1.46
VPS4BO75351 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 CYCSP38-201ENST00000559840 322 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC010735.1-201ENST00000567305 1026 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RN7SL475P-201ENST00000583379 298 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC008507.3-201ENST00000585753 472 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 BMS1P7-201ENST00000602440 1052 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC099785.1-201ENST00000605697 437 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 RPSAP75-201ENST00000605848 301 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 AL137067.2-201ENST00000621202 131 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 AC083865.1-201ENST00000636634 831 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 OR7A1P-202ENST00000641542 1158 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
VPS4BO75351 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.96□□□□□ -1.46
VPS4BO75351 MFSD8-213ENST00000641134 1327 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 AP000432.2-201ENST00000624164 2048 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
VPS4BO75351 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
VPS4BO75351 HSPD1P9-201ENST00000420325 1636 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 CASC19-246ENST00000641625 1606 ntBASIC5.96□□□□□ -1.46
VPS4BO75351 AC004656.1-201ENST00000568479 4951 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 AC016583.1-201ENST00000624221 2431 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VPS4BO75351 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 AC010132.2-201ENST00000295493 1043 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 RPL10P10-201ENST00000403509 664 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AL096711.1-201ENST00000404780 554 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 AL356968.2-201ENST00000412769 1257 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 RPL21P50-201ENST00000417698 477 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC073410.1-201ENST00000435125 589 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 PPIAP10-201ENST00000438675 458 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS4BO75351 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 RN7SL177P-201ENST00000476596 299 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AC124945.1-201ENST00000485133 188 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 RPL23AP40-201ENST00000487630 390 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 TRBV5-2-201ENST00000489095 273 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC005351.1-201ENST00000511152 786 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 RNA5SP418-201ENST00000515951 117 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 SNORA19.3-201ENST00000516165 130 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 AC091163.3-201ENST00000518269 1144 ntBASIC5.95□□□□□ -1.46
VPS4BO75351 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS4BO75351 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS4BO75351 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms