Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.27□□□□□ -1.57
SNX3O60493 RPL36AP55-201ENST00000454114 305 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 RBMY2HP-201ENST00000457961 720 ntBASIC5.27□□□□□ -1.57
SNX3O60493 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 RPS3AP15-201ENST00000483874 781 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.27□□□□□ -1.57
SNX3O60493 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 BTG4P1-201ENST00000510421 183 ntBASIC5.27□□□□□ -1.57
SNX3O60493 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 SEC11B-201ENST00000518383 499 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 PCNAP4-201ENST00000532690 730 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.27□□□□□ -1.57
SNX3O60493 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.27□□□□□ -1.57
SNX3O60493 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 AC092111.2-201ENST00000611627 1414 ntBASIC5.27□□□□□ -1.57
SNX3O60493 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.27□□□□□ -1.57
SNX3O60493 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 AL031595.2-201ENST00000624215 19071 ntBASIC5.27□□□□□ -1.57
SNX3O60493 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SNX3O60493 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.27□□□□□ -1.57
SNX3O60493 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SNX3O60493 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SNX3O60493 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 RNFT1P3-201ENST00000340898 1052 ntBASIC5.26□□□□□ -1.57
SNX3O60493 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 MIR431-201ENST00000385266 114 ntBASIC5.26□□□□□ -1.57
SNX3O60493 ARSFP1-201ENST00000398758 477 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC092646.1-201ENST00000427142 901 ntBASIC5.26□□□□□ -1.57
SNX3O60493 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SNX3O60493 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX3O60493 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 MORF4L1P4-201ENST00000450245 976 ntBASIC5.26□□□□□ -1.57
SNX3O60493 BX842559.2-201ENST00000451418 605 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC089999.1-201ENST00000460336 374 ntBASIC5.26□□□□□ -1.57
SNX3O60493 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.26□□□□□ -1.57
SNX3O60493 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.26□□□□□ -1.57
SNX3O60493 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 WBP1LP3-201ENST00000523033 208 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SNX3O60493 AC009027.1-201ENST00000604510 479 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC011626.1-201ENST00000604710 562 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC073111.2-201ENST00000605657 1075 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC018695.5-201ENST00000605872 315 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.26□□□□□ -1.57
SNX3O60493 AL135999.3-201ENST00000610501 812 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC004801.6-201ENST00000616571 978 ntBASIC5.26□□□□□ -1.57
SNX3O60493 AC009032.1-201ENST00000617574 431 ntBASIC5.26□□□□□ -1.57
SNX3O60493 OR10AB1P-202ENST00000641219 1686 ntBASIC5.26□□□□□ -1.57
SNX3O60493 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.26□□□□□ -1.57
SNX3O60493 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 NEPNP-201ENST00000404786 1371 ntBASIC5.26□□□□□ -1.57
SNX3O60493 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SNX3O60493 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SNX3O60493 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SNX3O60493 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 AC023421.1-201ENST00000590535 1785 ntBASIC5.25□□□□□ -1.57
SNX3O60493 AC006210.2-201ENST00000367074 1545 ntBASIC5.25□□□□□ -1.57
SNX3O60493 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.25□□□□□ -1.57
SNX3O60493 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SNX3O60493 RNU1-65P-201ENST00000363919 148 ntBASIC5.25□□□□□ -1.57
SNX3O60493 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms