Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC006115.2-201ENST00000596823 202 ntBASIC9.14□□□□□ -0.95
CUX2O14529 BNIP3P19-201ENST00000605397 577 ntBASIC9.14□□□□□ -0.95
CUX2O14529 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
CUX2O14529 MVP-219ENST00000629059 120 ntTSL 5 BASIC9.14□□□□□ -0.95
CUX2O14529 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
CUX2O14529 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC9.13□□□□□ -0.95
CUX2O14529 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC9.13□□□□□ -0.95
CUX2O14529 AC139713.2-214ENST00000642059 1811 ntBASIC9.13□□□□□ -0.95
CUX2O14529 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC9.13□□□□□ -0.95
CUX2O14529 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 RNA5SP326-201ENST00000363209 110 ntBASIC9.13□□□□□ -0.95
CUX2O14529 AC008280.1-201ENST00000418851 412 ntBASIC9.13□□□□□ -0.95
CUX2O14529 RPL12P34-201ENST00000424532 479 ntBASIC9.13□□□□□ -0.95
CUX2O14529 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC9.13□□□□□ -0.95
CUX2O14529 RPL34P20-201ENST00000442771 351 ntBASIC9.13□□□□□ -0.95
CUX2O14529 OR52J1P-201ENST00000450596 932 ntBASIC9.13□□□□□ -0.95
CUX2O14529 RPL7P32-201ENST00000457119 744 ntBASIC9.13□□□□□ -0.95
CUX2O14529 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC9.13□□□□□ -0.95
CUX2O14529 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC9.13□□□□□ -0.95
CUX2O14529 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC9.13□□□□□ -0.95
CUX2O14529 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.13□□□□□ -0.95
CUX2O14529 AC005341.1-201ENST00000571086 708 ntBASIC9.13□□□□□ -0.95
CUX2O14529 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 OFD1P8Y-201ENST00000449148 1433 ntBASIC9.13□□□□□ -0.95
CUX2O14529 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
CUX2O14529 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
CUX2O14529 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.12□□□□□ -0.95
CUX2O14529 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
CUX2O14529 WBP11P1-201ENST00000562560 1931 ntBASIC9.12□□□□□ -0.95
CUX2O14529 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.12□□□□□ -0.95
CUX2O14529 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC9.12□□□□□ -0.95
CUX2O14529 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
CUX2O14529 IL6-206ENST00000407492 926 ntTSL 3 BASIC9.12□□□□□ -0.95
CUX2O14529 VN1R21P-201ENST00000426703 765 ntBASIC9.12□□□□□ -0.95
CUX2O14529 AC023141.6-201ENST00000429418 337 ntBASIC9.12□□□□□ -0.95
CUX2O14529 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.12□□□□□ -0.95
CUX2O14529 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC9.12□□□□□ -0.95
CUX2O14529 AC004232.3-201ENST00000622977 525 ntBASIC9.12□□□□□ -0.95
CUX2O14529 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC9.12□□□□□ -0.95
CUX2O14529 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
CUX2O14529 AC073365.1-203ENST00000641055 1992 ntBASIC9.12□□□□□ -0.95
CUX2O14529 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC9.12□□□□□ -0.95
CUX2O14529 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
CUX2O14529 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CUX2O14529 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 MAPK10-349ENST00000641767 3661 ntBASIC9.11□□□□□ -0.95
CUX2O14529 CASC19-255ENST00000641733 1385 ntBASIC9.11□□□□□ -0.95
CUX2O14529 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.11□□□□□ -0.95
CUX2O14529 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC9.11□□□□□ -0.95
CUX2O14529 HSPA8P15-201ENST00000401676 786 ntBASIC9.11□□□□□ -0.95
CUX2O14529 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.11□□□□□ -0.95
CUX2O14529 RPSAP35-201ENST00000413753 818 ntBASIC9.11□□□□□ -0.95
CUX2O14529 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.11□□□□□ -0.95
CUX2O14529 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 GAPDHP56-201ENST00000506031 988 ntBASIC9.11□□□□□ -0.95
CUX2O14529 AC006133.1-201ENST00000617106 264 ntBASIC9.11□□□□□ -0.95
CUX2O14529 ZNRD1ASP-221ENST00000637794 1074 ntBASIC9.11□□□□□ -0.95
CUX2O14529 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.11□□□□□ -0.95
CUX2O14529 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC9.11□□□□□ -0.95
CUX2O14529 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CUX2O14529 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
CUX2O14529 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC9.1□□□□□ -0.95
CUX2O14529 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CUX2O14529 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CUX2O14529 CYP1D1P-201ENST00000416662 1433 ntBASIC9.1□□□□□ -0.95
CUX2O14529 RNU1-59P-201ENST00000364829 162 ntBASIC9.1□□□□□ -0.95
CUX2O14529 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC9.1□□□□□ -0.95
CUX2O14529 AC004074.1-201ENST00000421810 1063 ntBASIC9.1□□□□□ -0.95
CUX2O14529 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CUX2O14529 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC9.1□□□□□ -0.95
CUX2O14529 AL596266.1-201ENST00000448132 400 ntBASIC9.1□□□□□ -0.95
CUX2O14529 AC013356.1-201ENST00000489027 564 ntBASIC9.1□□□□□ -0.95
CUX2O14529 RN7SKP260-201ENST00000516907 149 ntBASIC9.1□□□□□ -0.95
CUX2O14529 IGKV3OR22-2-201ENST00000517943 313 ntBASIC9.1□□□□□ -0.95
CUX2O14529 IGHVIII-76-1-201ENST00000523776 286 ntBASIC9.1□□□□□ -0.95
CUX2O14529 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC9.1□□□□□ -0.95
CUX2O14529 AC023575.1-201ENST00000580510 358 ntBASIC9.1□□□□□ -0.95
CUX2O14529 AC069366.1-201ENST00000583159 838 ntBASIC9.1□□□□□ -0.95
CUX2O14529 U1.25-201ENST00000614085 162 ntBASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms