Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AC233702.9-201ENST00000581528 203 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AC009597.2-201ENST00000604659 592 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AL162431.4-201ENST00000604674 411 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AP001052.1-201ENST00000626421 99 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 LINC01963-201ENST00000562038 3148 ntBASIC4.47□□□□□ -1.69
TMEM235A6NFC5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TMEM235A6NFC5 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 YES1P1-201ENST00000418510 1628 ntBASIC4.46□□□□□ -1.69
TMEM235A6NFC5 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
TMEM235A6NFC5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC133552.1-201ENST00000569988 4007 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RN7SKP28-201ENST00000364770 305 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RN7SKP286-201ENST00000410894 299 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 FAM183DP-201ENST00000421987 399 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 OR5M12P-201ENST00000423388 929 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 SRSF1P1-201ENST00000424058 520 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 TIMM8BP2-201ENST00000445940 251 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 EEF1B2P3-201ENST00000447718 678 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC093166.3-201ENST00000448785 303 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RN7SL189P-201ENST00000468631 289 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RN7SL423P-201ENST00000486202 304 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 HMGB1P44-201ENST00000508597 572 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 BNIP3P1-201ENST00000547295 580 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 IGBP1P1-201ENST00000554337 1009 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RBM22P12-201ENST00000567098 1255 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC005341.1-201ENST00000571086 708 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC129778.1-202ENST00000623812 261 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 MTCO1P1-201ENST00000624263 1081 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AL591379.1-207ENST00000635982 261 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TMEM235A6NFC5 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
TMEM235A6NFC5 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.45□□□□□ -1.7
TMEM235A6NFC5 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 RN7SKP171-201ENST00000364417 303 ntBASIC4.45□□□□□ -1.7
TMEM235A6NFC5 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 HSPA8P15-201ENST00000401676 786 ntBASIC4.45□□□□□ -1.7
TMEM235A6NFC5 OR2AH1P-201ENST00000425717 928 ntBASIC4.45□□□□□ -1.7
TMEM235A6NFC5 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.45□□□□□ -1.7
TMEM235A6NFC5 CLUHP1-201ENST00000435012 1190 ntBASIC4.45□□□□□ -1.7
TMEM235A6NFC5 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms