Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 BPTFP1-201ENST00000579209 492 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC022239.4-201ENST00000602626 504 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SEPT7P9-203ENST00000604116 343 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC104458.1-201ENST00000608243 463 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC007742.2-201ENST00000618226 398 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 OR1N1-202ENST00000619659 939 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 SNX18P10-201ENST00000625014 519 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL355480.4-201ENST00000626823 69 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.12□□□□□ -1.43
SHISA3A0PJX4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHISA3A0PJX4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC119674.1-204ENST00000641348 1343 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 RNU6-666P-201ENST00000363499 107 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 RNA5SP88-201ENST00000365560 109 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TMSB4XP8-201ENST00000402089 135 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TMSB4XP6-201ENST00000415187 135 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 TMSB4XP1-201ENST00000424567 135 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 VN1R20P-201ENST00000425215 966 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 DPY19L1P2-201ENST00000426647 915 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC002069.1-201ENST00000429649 1159 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC007790.1-201ENST00000439081 782 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC079781.1-201ENST00000441505 394 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL135929.1-201ENST00000449287 552 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 SNORA81.1-201ENST00000458922 177 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 SNORD42A-201ENST00000459584 64 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC026254.1-201ENST00000479473 431 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC097263.1-201ENST00000496795 606 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 OR8Q1P-201ENST00000526467 655 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL135978.1-201ENST00000553618 1266 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC010719.1-201ENST00000602992 747 ntBASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SHISA3A0PJX4 AC012150.2-201ENST00000621300 544 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms