Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 RNA5SP122-201ENST00000384457 108 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 SNORD56.6-201ENST00000384569 71 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 SNORA48.4-201ENST00000391089 134 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AL359643.1-201ENST00000404109 423 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC211486.3-201ENST00000412694 621 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC007161.1-204ENST00000423039 460 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AL133173.1-201ENST00000423458 397 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 MTND6P12-201ENST00000428247 522 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC073465.2-201ENST00000440938 498 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 EEF1B2P6-201ENST00000445713 673 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AP000547.1-201ENST00000454360 617 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 RN7SL583P-201ENST00000475692 287 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 NPM1P29-201ENST00000483112 803 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 OR11I1P-201ENST00000486033 954 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC138866.2-201ENST00000508650 584 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 MIR6861-201ENST00000618657 64 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 AC091932.2-201ENST00000623014 291 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 ADAM5-202ENST00000399789 1942 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DRB4X5D2U9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC083843.2-201ENST00000568248 6253 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 RN7SKP6-201ENST00000364795 319 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 RNU4-2-201ENST00000365668 141 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 OR6C64P-201ENST00000419708 825 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 TRGV5P-201ENST00000419915 354 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 FMO7P-201ENST00000436045 768 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 OR6D1P-201ENST00000436165 939 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC002504.1-201ENST00000438281 691 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 NPM1P33-201ENST00000438918 872 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 GTF3AP5-201ENST00000442645 697 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC073109.1-201ENST00000445066 978 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AL450023.1-201ENST00000450868 751 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AZGP1P2-201ENST00000454506 345 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC090568.1-201ENST00000509499 856 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC016559.2-201ENST00000510759 359 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC112191.2-201ENST00000522428 333 ntBASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DRB4X5D2U9 AC008521.2-201ENST00000591021 259 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms