Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC138907.8-201ENST00000623981 2256 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 NUDT19P3-201ENST00000404698 555 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC073648.4-201ENST00000442655 781 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 RPL7AP61-201ENST00000443410 636 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 STRADBP1-201ENST00000478954 1281 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC093827.1-201ENST00000480094 861 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC084824.2-201ENST00000548906 345 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC011626.1-201ENST00000604710 562 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC079414.3-201ENST00000612986 1090 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC079298.1-201ENST00000625026 1619 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AL355834.1-201ENST00000556602 3965 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 RNU4-64P-201ENST00000410795 131 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 GTF2IP5-201ENST00000414608 731 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC019050.1-201ENST00000418508 492 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC099670.2-201ENST00000435130 321 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC006466.1-201ENST00000438721 289 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 RPL7P40-201ENST00000481703 745 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC008745.1-201ENST00000604064 271 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 BNIP3P35-201ENST00000604530 490 ntBASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN11AQ9UI33 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 RN7SKP100-201ENST00000411258 284 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 H3F3BP1-201ENST00000440551 403 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 UBE2FP2-201ENST00000566646 462 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 MIR4270-201ENST00000581799 70 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 RN7SL690P-201ENST00000582087 240 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AL021877.2-201ENST00000624442 10684 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 AC107980.1-201ENST00000558671 3355 ntBASIC6.66□□□□□ -1.34
SCN11AQ9UI33 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SCN11AQ9UI33 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 GJA6P-201ENST00000415117 1042 ntBASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC010350.1-201ENST00000504908 231 ntBASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 RNA5SP392-201ENST00000516905 112 ntBASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 BNIP3P1-201ENST00000547295 580 ntBASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SCN11AQ9UI33 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.65□□□□□ -1.35
SCN11AQ9UI33 AC063976.2-201ENST00000425667 3556 ntBASIC6.65□□□□□ -1.35
SCN11AQ9UI33 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms