Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 MAPK10-328ENST00000641553 4009 ntBASIC6.46□□□□□ -1.38
CLIP2Q9UDT6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AC010266.2-201ENST00000564741 3255 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 U3.7-201ENST00000363668 216 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RNA5SP335-201ENST00000363817 110 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RNA5SP187-201ENST00000384400 119 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RPSAP35-201ENST00000413753 818 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AC105399.1-202ENST00000447303 205 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RPL7P39-201ENST00000481157 744 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RN7SL30P-201ENST00000488416 306 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 RNA5SP92-201ENST00000516437 110 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AC126177.5-201ENST00000549599 178 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AC107993.1-201ENST00000591343 684 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AL512329.2-201ENST00000607350 548 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 AC008115.4-201ENST00000619780 775 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 PROS2P-201ENST00000474651 1951 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 PABPC1P6-201ENST00000445594 1829 ntBASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CLIP2Q9UDT6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AL133325.1-201ENST00000421090 382 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 OR10T1P-201ENST00000424327 947 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 LYPLA1P1-201ENST00000434514 622 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC090286.3-201ENST00000573133 187 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC010487.1-201ENST00000594408 1172 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC244517.3-201ENST00000616254 1235 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AC010809.3-201ENST00000621310 641 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 C4BPAP1-201ENST00000415474 1893 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AL590763.1-201ENST00000398297 1545 ntBASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CLIP2Q9UDT6 HSPD1P7-201ENST00000447985 1686 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 RNA5SP183-201ENST00000362452 119 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 GPS2P1-201ENST00000411761 986 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 SLC35E1P1-201ENST00000419313 864 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 RPSAP41-201ENST00000439695 860 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 ATP5LP5-201ENST00000483050 299 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 RPEP1-201ENST00000504507 658 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AL049779.2-201ENST00000553847 315 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC004825.1-201ENST00000555068 586 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 AC051619.2-201ENST00000559063 397 ntBASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.43□□□□□ -1.38
CLIP2Q9UDT6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms