Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 RNA5SP273-201ENST00000362484 113 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 MTCO2P23-201ENST00000425216 680 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC113412.1-201ENST00000425840 504 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 NPM1P26-201ENST00000426339 738 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ARL5AP3-201ENST00000439327 386 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 MTCO2P6-201ENST00000463134 685 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 PRELID3BP5-201ENST00000508612 460 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC034205.1-201ENST00000520621 638 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 UBTFL9-201ENST00000534504 1148 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AL121652.1-201ENST00000608851 448 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AL645927.2-201ENST00000618350 349 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC079298.2-201ENST00000623885 459 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC092724.1-201ENST00000624623 3397 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AF287957.1-201ENST00000607368 1595 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
DKK3Q9UBP4 AC009501.3-201ENST00000605001 1352 ntBASIC6.06□□□□□ -1.44
DKK3Q9UBP4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 RN7SKP81-201ENST00000365603 331 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 MIR421-201ENST00000365696 85 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 PCNPP4-201ENST00000414817 517 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 RPS17P17-201ENST00000419392 409 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 BX284632.2-201ENST00000421091 399 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 NMD3P2-201ENST00000421815 761 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 RNF19BPX-201ENST00000426224 625 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL512605.1-202ENST00000441919 381 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL359955.2-201ENST00000445380 353 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 RN7SL269P-201ENST00000467795 305 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 OR5H7P-201ENST00000514084 930 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC016550.3-201ENST00000515706 767 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC104115.2-201ENST00000523026 687 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC098935.2-201ENST00000604222 466 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC025811.1-201ENST00000604312 472 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC120349.3-201ENST00000624377 529 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 AC129915.3-201ENST00000634128 948 ntBASIC6.05□□□□□ -1.44
DKK3Q9UBP4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.05□□□□□ -1.44
DKK3Q9UBP4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 805.9 ms