Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RPS4XP1-201ENST00000482189 787 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 RN7SL30P-201ENST00000488416 306 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC024558.1-201ENST00000505008 528 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC093763.2-201ENST00000505334 1223 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC006499.3-201ENST00000506077 748 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ASNSP4-201ENST00000511103 447 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 SNORA70.11-201ENST00000515987 138 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 SNORA70.13-201ENST00000516116 138 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 RNU6-467P-201ENST00000517027 110 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 TMF1P1-201ENST00000576058 373 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC132068.1-201ENST00000623805 459 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL356094.1-201ENST00000624663 1212 ntBASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HDAC6Q9UBN7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 SETP10-201ENST00000424368 814 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 NANOGP4-201ENST00000427230 913 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 GAPDHP58-201ENST00000438477 1006 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 RN7SL610P-201ENST00000463845 291 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC006539.1-201ENST00000481419 501 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 TRBV8-1-201ENST00000481590 279 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC090638.1-201ENST00000498296 909 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 ATG10-AS1-201ENST00000504846 648 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC090424.1-201ENST00000535243 736 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 RPL21P136-201ENST00000605378 396 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AL136370.1-201ENST00000608166 691 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC090607.5-201ENST00000615692 224 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC008115.4-201ENST00000619780 775 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 MIR6837-201ENST00000620884 64 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 MIR6730-201ENST00000622213 67 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC136428.4-201ENST00000634254 1155 ntBASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.32□□□□□ -1.4
HDAC6Q9UBN7 AC097063.1-201ENST00000426714 1797 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC053481.2-202ENST00000582394 1500 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 RN7SKP28-201ENST00000364770 305 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 SNORA70-201ENST00000384436 135 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AL050305.1-201ENST00000399993 1230 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 MIR937-201ENST00000401271 86 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC106901.1-201ENST00000425086 698 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 NPM1P22-201ENST00000427761 952 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 RPL5P2-201ENST00000429598 854 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC073072.2-201ENST00000447425 348 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC093270.2-201ENST00000486157 792 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC117525.1-201ENST00000515228 503 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 OR10G5P-201ENST00000532733 358 ntBASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HDAC6Q9UBN7 AC007346.2-201ENST00000564816 892 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms