Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 IMPA1P1-201ENST00000510718 842 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC074255.1-201ENST00000511259 501 ntBASIC5.11□□□□□ -1.59
CCDC88CQ9P219 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC88CQ9P219 AL022311.1-201ENST00000623726 19416 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 UGT2B24P-201ENST00000514441 1597 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 SRSF1P1-201ENST00000424058 520 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 RN7SL814P-201ENST00000487715 300 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 RPL37AP8-201ENST00000494116 276 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AC122688.1-201ENST00000541494 223 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 MIR3691-201ENST00000578066 90 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 MIR7853-201ENST00000584820 132 ntBASIC5.1□□□□□ -1.59
CCDC88CQ9P219 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CCDC88CQ9P219 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC073465.2-201ENST00000440938 498 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC108751.3-201ENST00000461814 1020 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 RN7SL329P-201ENST00000467740 299 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC091912.1-201ENST00000511351 248 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC024940.3-201ENST00000538551 316 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC002069.2-201ENST00000603580 883 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 MIR7155-201ENST00000615925 56 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AL445528.2-201ENST00000620582 470 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 CR383656.5-201ENST00000547616 1340 ntBASIC5.09□□□□□ -1.59
CCDC88CQ9P219 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC88CQ9P219 AC058823.1-201ENST00000485315 474 ntBASIC5.09□□□□□ -1.6
CCDC88CQ9P219 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC88CQ9P219 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC88CQ9P219 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms