Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR589-201ENST00000385238 99 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 GSTM5P1-201ENST00000434751 660 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 FMO7P-201ENST00000436045 768 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 Z84478.1-201ENST00000438230 1219 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 CTSLP6-201ENST00000458273 1002 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC108161.1-201ENST00000461060 402 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 HMGB1P44-201ENST00000508597 572 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 SCARNA16.4-201ENST00000516956 187 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL162431.4-201ENST00000604674 411 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 MIR6889-201ENST00000613185 59 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 MIR193BHG-214ENST00000641765 509 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 SAMMSON-227ENST00000642114 1199 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC112198.2-201ENST00000426589 6996 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC083843.2-201ENST00000568248 6253 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 THAP12P5-201ENST00000405864 2275 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL022322.2-201ENST00000624072 20397 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC023421.1-201ENST00000590535 1785 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 RNU6-249P-201ENST00000363016 102 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 RNU4-2-201ENST00000365668 141 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 PCNPP4-201ENST00000414817 517 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC093155.2-201ENST00000420734 937 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 RN7SL273P-201ENST00000481561 299 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 NRBF2P4-201ENST00000520874 850 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC006349.1-201ENST00000555526 235 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 MIR744-201ENST00000578242 98 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 SAMMSON-213ENST00000641336 1521 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 CASC19-255ENST00000641733 1385 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AC100778.3-201ENST00000580060 1750 ntBASIC5.01□□□□□ -1.61
VAPAQ9P0L0 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.01□□□□□ -1.61
VAPAQ9P0L0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5□□□□□ -1.61
VAPAQ9P0L0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5□□□□□ -1.61
VAPAQ9P0L0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5□□□□□ -1.61
VAPAQ9P0L0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 AC005294.1-201ENST00000355509 281 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 RNA5SP433-201ENST00000364491 114 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5□□□□□ -1.61
VAPAQ9P0L0 RNA5SP296-201ENST00000410523 111 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 AC002524.1-201ENST00000411687 547 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 HMGN1P20-201ENST00000411849 300 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 AL596448.1-201ENST00000415024 392 ntBASIC5□□□□□ -1.61
VAPAQ9P0L0 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5□□□□□ -1.61
VAPAQ9P0L0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5□□□□□ -1.61
VAPAQ9P0L0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5□□□□□ -1.61
VAPAQ9P0L0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms