Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HMGB3P31-201ENST00000413333 595 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 FDPSP6-201ENST00000425091 512 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 CHCHD3P1-201ENST00000425516 676 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 DDX11L10-201ENST00000430178 571 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC123904.1-201ENST00000441072 368 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RPSAP40-201ENST00000442343 891 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OFD1P4Y-201ENST00000455273 1179 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC004692.1-201ENST00000455430 424 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 ACTG1P13-201ENST00000486987 1043 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC079768.1-201ENST00000503181 711 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC026782.1-201ENST00000512952 449 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC106800.2-201ENST00000514009 1103 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 PAICSP4-201ENST00000517543 1253 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 LINC01608-202ENST00000524283 561 ntTSL 4 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 OR4C2P-201ENST00000530855 1064 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AP004833.3-201ENST00000531893 322 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 CHCHD3P2-201ENST00000550751 639 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC020661.2-201ENST00000560114 134 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC040162.2-201ENST00000573092 157 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC129492.5-201ENST00000603489 315 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL451085.1-201ENST00000604546 690 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AP000238.1-201ENST00000608759 426 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AP001521.2-201ENST00000608772 546 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL451054.1-201ENST00000621770 772 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AC110769.3-201ENST00000624567 1173 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL034370.1-201ENST00000397254 1590 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 AL591543.1-202ENST00000642095 4149 ntBASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
CUEDC1Q9NWM3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AL161891.1-201ENST00000621575 4636 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-845P-201ENST00000362578 103 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-767P-201ENST00000384132 107 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RNU6-729P-201ENST00000384399 107 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 MIR27A-201ENST00000385073 78 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 GAS8-AS1-201ENST00000408886 435 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RNA5SP498-201ENST00000411342 120 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC004986.1-201ENST00000414855 607 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 ATP5LP4-201ENST00000434169 307 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 TAAR7P-201ENST00000436141 242 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 CYP2C56P-201ENST00000440076 291 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 FO393419.1-201ENST00000443746 355 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RPSAP49-201ENST00000445182 886 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 HIST1H2APS6-201ENST00000448609 364 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC140076.1-201ENST00000449897 361 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 CHIAP1-201ENST00000456220 995 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 snoU109.1-201ENST00000459339 135 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 NDUFB4P1-201ENST00000462398 381 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC130509.1-201ENST00000464158 433 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RN7SL228P-201ENST00000470060 303 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RPL5P15-201ENST00000475870 897 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC018475.1-201ENST00000478358 465 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 AC091544.1-201ENST00000484702 348 ntBASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.36□□□□□ -1.23
CUEDC1Q9NWM3 RPS7P6-201ENST00000485777 579 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms