Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 ZNF322P1-201ENST00000568013 1209 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 COX6CP7-201ENST00000597056 208 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 MTATP6P2-201ENST00000603319 678 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AL158050.2-201ENST00000605336 568 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AC034236.3-201ENST00000605999 461 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AC112503.2-201ENST00000609005 552 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AL445984.1-201ENST00000637834 659 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
USP29Q9HBJ7 AC015689.2-201ENST00000528172 1738 ntBASIC5.99□□□□□ -1.45
USP29Q9HBJ7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 TMSB4XP4-201ENST00000323496 618 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RNU6-792P-201ENST00000363490 107 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RNA5SP91-201ENST00000390902 119 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RN7SKP229-201ENST00000410465 302 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 MTCO2P1-201ENST00000424648 477 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RNF19BPX-201ENST00000426224 625 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ARL5AP3-201ENST00000439327 386 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AL513321.1-201ENST00000441175 761 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC015983.1-201ENST00000441577 373 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC023141.8-201ENST00000442554 208 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC090602.1-201ENST00000469695 252 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC093663.2-201ENST00000484625 313 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RN7SL193P-201ENST00000491708 276 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC103833.1-201ENST00000517442 172 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 WBP1LP3-201ENST00000523033 208 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 HMGB1P51-201ENST00000605166 638 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC004775.1-201ENST00000607389 753 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 AC063944.3-201ENST00000609969 533 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.98□□□□□ -1.45
USP29Q9HBJ7 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
USP29Q9HBJ7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 UGT2B24P-201ENST00000514441 1597 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AP002512.4-202ENST00000641599 4530 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RN7SKP292-201ENST00000365522 317 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 MIR122-201ENST00000385044 85 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC087752.1-201ENST00000391360 558 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC016739.1-201ENST00000405359 345 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 NACAP7-201ENST00000407371 609 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 MIR1203-201ENST00000408812 85 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RN7SKP293-201ENST00000411389 296 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC069282.1-201ENST00000411911 526 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 GAPDHP48-201ENST00000436626 961 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL512605.1-202ENST00000441919 381 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 AL359955.2-201ENST00000445380 353 ntBASIC5.97□□□□□ -1.45
USP29Q9HBJ7 RPL31P20-201ENST00000449593 360 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms