Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
CHMP4AQ9BY43 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.44□□□□□ -1.22
CHMP4AQ9BY43 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AP000756.2-201ENST00000624168 2567 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 BMS1P17-202ENST00000416720 316 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AL356806.1-201ENST00000422524 916 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 NPM1P22-201ENST00000427761 952 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 RPL12P16-201ENST00000431098 498 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC073410.1-201ENST00000435125 589 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 MEMO1P4-201ENST00000453590 386 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AL157777.1-201ENST00000468100 304 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 SLC25A51P1-201ENST00000468432 871 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC108157.1-201ENST00000510511 539 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 TOMM22P4-201ENST00000511318 336 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC067904.2-201ENST00000517322 1283 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 IGLVIV-64-201ENST00000518581 301 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC126175.1-201ENST00000617041 758 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC022919.1-201ENST00000624979 626 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 AC119674.1-212ENST00000641155 993 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 OR11H2-202ENST00000641517 1085 ntBASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.43□□□□□ -1.22
CHMP4AQ9BY43 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 CRIP1P1-201ENST00000427567 185 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC092013.1-201ENST00000438795 332 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 Z99127.2-201ENST00000441426 334 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC064862.4-201ENST00000442180 334 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 OR7E116P-201ENST00000448529 957 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 RPS23P2-201ENST00000463671 415 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC006539.1-201ENST00000481419 501 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC105384.2-201ENST00000508433 640 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 RNU6-615P-201ENST00000516065 106 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 IGKV3D-34-201ENST00000522638 302 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AC103703.1-201ENST00000634783 663 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 AL158152.1-201ENST00000602652 1435 ntBASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.42□□□□□ -1.22
CHMP4AQ9BY43 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC083843.2-201ENST00000568248 6253 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 PWAR1-201ENST00000624188 2414 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 MIR323A-201ENST00000362199 86 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 RN7SKP81-201ENST00000365603 331 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 SNORA70.9-201ENST00000384370 135 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 GAPDHP42-201ENST00000406848 981 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 RN7SKP286-201ENST00000410894 299 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 RNF10P1-201ENST00000418589 369 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 RNGTTP1-201ENST00000420965 728 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms