Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 EEF1B2P8-201ENST00000414101 671 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 TRIM60P17-201ENST00000415181 719 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.51□□□□□ -1.53
PKP4Q99569 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.51□□□□□ -1.53
PKP4Q99569 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.51□□□□□ -1.53
PKP4Q99569 RPS3AP15-201ENST00000483874 781 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 OR7E157P-201ENST00000494376 911 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 DUTP7-201ENST00000507982 486 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.51□□□□□ -1.53
PKP4Q99569 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC022826.1-201ENST00000519383 805 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.51□□□□□ -1.53
PKP4Q99569 AL136520.1-202ENST00000555494 763 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC008147.4-201ENST00000617570 1204 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 AL390318.1-201ENST00000624564 687 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.51□□□□□ -1.53
PKP4Q99569 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.51□□□□□ -1.53
PKP4Q99569 AC144833.1-201ENST00000567953 4089 ntBASIC5.51□□□□□ -1.53
PKP4Q99569 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PKP4Q99569 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
PKP4Q99569 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 OR13C1P-202ENST00000641378 2919 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 SRRM1P3-201ENST00000426911 2678 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 RNU6-249P-201ENST00000363016 102 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 RNA5SP510-201ENST00000364697 99 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PKP4Q99569 AC005042.1-201ENST00000393397 800 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 HMGB3P7-201ENST00000400214 611 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PKP4Q99569 BX119321.1-201ENST00000428912 797 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 RPL12P18-201ENST00000437175 325 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 SCAND3P1-201ENST00000439854 1060 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AC073109.1-201ENST00000445066 978 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 VN1R48P-201ENST00000448149 1036 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 AC018635.1-201ENST00000468292 1030 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 GAPDHP62-201ENST00000515313 990 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 RNU6-615P-201ENST00000516065 106 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
PKP4Q99569 MIR4310-201ENST00000582950 57 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL139022.2-201ENST00000606934 443 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AC015982.1-201ENST00000608113 465 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 MIR6861-201ENST00000618657 64 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.5□□□□□ -1.53
PKP4Q99569 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 AP005435.3-201ENST00000531260 3198 ntBASIC5.5□□□□□ -1.53
PKP4Q99569 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PKP4Q99569 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.5□□□□□ -1.53
PKP4Q99569 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.5□□□□□ -1.53
PKP4Q99569 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PKP4Q99569 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PKP4Q99569 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PKP4Q99569 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.49□□□□□ -1.53
PKP4Q99569 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms