Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 RN7SKP47-201ENST00000365347 328 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL035419.1-201ENST00000397037 564 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 GLULP6-201ENST00000399502 913 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 SNRPEP6-201ENST00000407465 277 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 RNU4-62P-201ENST00000410125 130 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 MTATP6P18-201ENST00000417994 673 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 MAPK6PS6-201ENST00000420752 1053 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC092447.2-201ENST00000435487 669 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL513321.1-201ENST00000441175 761 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 MTATP6P30-201ENST00000443540 664 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC107399.1-201ENST00000451226 265 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC013787.1-201ENST00000460165 307 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 RN7SL591P-201ENST00000496150 292 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL121839.1-201ENST00000556233 1185 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 VN1R92P-201ENST00000598511 928 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL161729.3-201ENST00000603533 673 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL008723.3-201ENST00000608926 449 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC009237.15-201ENST00000610252 501 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL359314.1-201ENST00000616913 261 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC025521.1-201ENST00000621624 286 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC119674.1-201ENST00000641611 1210 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ERCC6-202ENST00000374127 1782 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 KPNB1-201ENST00000290158 6139 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 LARS-202ENST00000394434 4766 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC063976.2-201ENST00000425667 3556 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 RNU2-65P-201ENST00000410162 185 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC092638.1-201ENST00000411966 1275 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 OR5BE1P-201ENST00000425977 939 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 GAPDHP51-201ENST00000426454 1000 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC011753.3-201ENST00000443436 406 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC009120.1-201ENST00000493458 473 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 NIPA2P2-201ENST00000496376 1083 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC021220.1-201ENST00000507445 630 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC095052.1-201ENST00000509955 863 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC087272.1-201ENST00000523624 533 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 GTF2IP11-201ENST00000526931 420 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC068339.2-201ENST00000534395 618 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 RPS3AP4-201ENST00000555161 764 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC021483.2-201ENST00000567415 758 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.94□□□□□ -2.1
HMCN1Q96RW7 AC015801.1-201ENST00000585651 153 ntBASIC1.94□□□□□ -2.1
HMCN1Q96RW7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms