Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC092106.1-201ENST00000444291 373 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AL096829.2-201ENST00000446582 742 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 REG1CP-206ENST00000447469 496 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AL157827.1-201ENST00000447622 132 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AC239798.3-201ENST00000454459 408 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC092865.4-201ENST00000477936 615 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HPS3Q969F9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AP000619.2-201ENST00000546014 969 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC124283.4-201ENST00000581815 456 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 LSM1P2-201ENST00000604911 322 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AC145423.1-201ENST00000605712 336 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC078880.5-201ENST00000617845 421 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AC245014.3-201ENST00000618589 347 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AL445670.1-201ENST00000618889 801 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC073342.3-201ENST00000624211 193 ntBASIC6.47□□□□□ -1.37
HPS3Q969F9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
HPS3Q969F9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HPS3Q969F9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
HPS3Q969F9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
HPS3Q969F9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
HPS3Q969F9 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
HPS3Q969F9 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.46□□□□□ -1.37
HPS3Q969F9 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
HPS3Q969F9 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HPS3Q969F9 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
HPS3Q969F9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.46□□□□□ -1.37
HPS3Q969F9 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HPS3Q969F9 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 RN7SKP186-201ENST00000365371 303 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC004386.1-201ENST00000393214 761 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 MRPL53P1-201ENST00000414323 319 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HPS3Q969F9 BX284632.2-201ENST00000421091 399 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC066692.1-201ENST00000421721 457 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC093084.1-201ENST00000424233 687 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC021876.1-201ENST00000425959 359 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HPS3Q969F9 PCBP2P1-201ENST00000437262 977 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 VN1R110P-201ENST00000438988 971 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AL512605.1-202ENST00000441919 381 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AL359955.2-201ENST00000445380 353 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 CFL1P4-201ENST00000451536 498 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 RSU1P1-201ENST00000453416 441 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC025458.1-201ENST00000506046 166 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC006499.4-201ENST00000510947 694 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 PCNAP4-201ENST00000532690 730 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.46□□□□□ -1.38
HPS3Q969F9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AC007956.1-201ENST00000555623 542 ntBASIC6.46□□□□□ -1.38
HPS3Q969F9 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.46□□□□□ -1.38
HPS3Q969F9 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.46□□□□□ -1.38
HPS3Q969F9 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms