Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC004223.2-201ENST00000590309 544 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC108673.3-201ENST00000609183 335 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC124016.2-201ENST00000610058 665 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC092266.1-201ENST00000610958 165 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC097641.3-201ENST00000613523 464 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC005618.4-201ENST00000625053 554 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.94□□□□□ -1.46
ATG4AQ8WYN0 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP74-201ENST00000362849 309 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RNA5SP232-201ENST00000364144 119 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP171-201ENST00000364417 303 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL355615.1-201ENST00000406187 641 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP86-201ENST00000410454 332 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RMRPP5-201ENST00000411156 267 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL158827.1-201ENST00000416300 391 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 VPS26BP1-201ENST00000417155 755 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 RNGTTP1-201ENST00000420965 728 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 MEMO1P4-201ENST00000453590 386 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC008410.1-201ENST00000483777 339 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC010476.1-201ENST00000519111 851 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 OR8G5-201ENST00000524943 1041 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 LRRC34P1-201ENST00000542742 915 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC006530.1-201ENST00000555980 571 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AP004372.1-201ENST00000604842 844 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AL136131.3-201ENST00000607600 188 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC021851.1-201ENST00000608537 1082 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC009464.1-201ENST00000615731 469 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 AC078880.5-201ENST00000617845 421 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 CR382285.2-201ENST00000624662 1495 ntBASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.93□□□□□ -1.46
ATG4AQ8WYN0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 RN7SKP28-201ENST00000364770 305 ntBASIC5.92□□□□□ -1.46
ATG4AQ8WYN0 RNU6-354P-201ENST00000383862 107 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms