Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RN7SKP70-201ENST00000516655 271 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC026956.1-201ENST00000558741 396 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC244034.2-201ENST00000562504 509 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 OR1E3-201ENST00000575608 948 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 MIR4789-201ENST00000577469 82 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC011260.1-201ENST00000578420 472 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 IMMP1LP1-201ENST00000605170 488 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 SNORD96A-201ENST00000606577 79 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AC034229.6-201ENST00000623704 224 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 AP000866.6-201ENST00000638898 3579 ntBASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
SHKBP1Q8TBC3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHKBP1Q8TBC3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHKBP1Q8TBC3 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.28
SHKBP1Q8TBC3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
SHKBP1Q8TBC3 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MCTS2P-201ENST00000394552 546 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 RPS7P9-201ENST00000414704 586 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 RPL36P18-201ENST00000419316 318 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 GTF2IP2-201ENST00000424290 697 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AL645939.3-201ENST00000435408 225 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 COX6CP2-201ENST00000444980 225 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MRPL35P2-201ENST00000448009 511 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 CTSLP6-201ENST00000458273 1002 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 OR52H2P-201ENST00000514607 902 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AP003392.2-201ENST00000527269 208 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ISCA1P3-201ENST00000577104 373 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MIR3154-201ENST00000577829 84 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MIR4999-201ENST00000585029 91 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC245052.7-201ENST00000601161 359 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AP000907.4-201ENST00000604143 237 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC114477.1-201ENST00000605097 605 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC005377.1-201ENST00000605126 456 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 PART1_1.1-201ENST00000611761 217 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC008443.7-201ENST00000622195 246 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 OR1S1-201ENST00000624470 978 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 AL121936.2-201ENST00000641935 662 ntBASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SHKBP1Q8TBC3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SHKBP1Q8TBC3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms