Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC243960.7-201ENST00000623532 707 ntBASIC5.74□□□□□ -1.49
LMO3Q8TAP4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 AC137056.2-201ENST00000624055 1958 ntBASIC5.74□□□□□ -1.49
LMO3Q8TAP4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LMO3Q8TAP4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 RNA5SP183-201ENST00000362452 119 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 RNA5SP178-201ENST00000410380 128 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 FCF1P7-201ENST00000451185 558 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 DNAJB5P1-201ENST00000454004 806 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 SETP20-201ENST00000457046 852 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 RPL7P6-201ENST00000480903 738 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 RPL7P41-201ENST00000485823 957 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 RPL37AP8-201ENST00000494116 276 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC022360.1-201ENST00000521058 340 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 IGKV3D-34-201ENST00000522638 302 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AL731537.2-201ENST00000561565 951 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AL158211.1-201ENST00000566763 763 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC011626.1-201ENST00000604710 562 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC004477.3-201ENST00000614061 590 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 AL163152.1-201ENST00000642001 374 ntBASIC5.73□□□□□ -1.49
LMO3Q8TAP4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LMO3Q8TAP4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RNU1-19P-201ENST00000363306 165 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RN7SKP69-201ENST00000365390 305 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RNU1-77P-201ENST00000390868 162 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RNA5SP487-201ENST00000410186 122 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 GAPDHP14-201ENST00000450472 937 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 CBX1P2-201ENST00000453841 458 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AC108161.1-201ENST00000461060 402 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RPL7P51-201ENST00000490532 749 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 EIF3KP3-201ENST00000514461 639 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 RNU6-941P-201ENST00000516346 108 ntBASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LMO3Q8TAP4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms