Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DNAAF1Q8NEP3 EIF3EP1-201ENST00000433978 1316 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL034546.1-201ENST00000623740 3693 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RN7SKP128-201ENST00000364270 303 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RPL5P19-201ENST00000404228 893 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC096533.1-201ENST00000411645 353 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 OR13Z1P-201ENST00000416141 834 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC008173.1-201ENST00000418901 264 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL035458.1-201ENST00000433096 585 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC099670.2-201ENST00000435130 321 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC138866.2-201ENST00000508650 584 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 GUSBP9-201ENST00000510138 584 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 MTND1P8-201ENST00000571424 950 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RN7SL66P-201ENST00000582099 264 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC012254.4-201ENST00000588843 273 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC119403.2-201ENST00000590960 598 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 MIR6774-201ENST00000614651 70 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC021106.3-201ENST00000623925 531 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 SNX18P12-201ENST00000624821 759 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC013437.2-201ENST00000639587 677 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 HSPD1P11-201ENST00000508643 1702 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 AC117409.1-201ENST00000470499 1310 ntBASIC5.23□□□□□ -1.57
DNAAF1Q8NEP3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 PARP4P2-201ENST00000446672 3326 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 AC068870.3-201ENST00000625077 2536 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 AP005432.1-201ENST00000580891 3485 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RNU105B-201ENST00000364478 208 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RNU6-729P-201ENST00000384399 107 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 AC104297.1-201ENST00000393779 870 ntBASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DNAAF1Q8NEP3 RNU6-584P-201ENST00000410350 95 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms