Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PRPF38AP1-201ENST00000451976 933 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 NPM1P29-201ENST00000483112 803 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC022133.1-201ENST00000490961 571 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 IGBP1P4-201ENST00000503202 879 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AL158068.1-201ENST00000506116 616 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 IMPA1P1-201ENST00000510718 842 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 EIF3KP3-201ENST00000514461 639 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC018442.3-201ENST00000523025 183 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 HMGN2P36-201ENST00000529541 409 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 PCNAP4-201ENST00000532690 730 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC006530.1-201ENST00000555980 571 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC079791.1-201ENST00000605356 973 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 RLIMP2-201ENST00000427891 1563 ntBASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC71LQ8N9Z2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 THAP12P8-201ENST00000447914 2115 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 MAPK10-320ENST00000641462 6696 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 RN7SKP224-201ENST00000364140 325 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 RPSAP35-201ENST00000413753 818 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 CDY17P-201ENST00000414121 1282 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 VN1R31P-201ENST00000417498 730 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 CDY8P-201ENST00000428380 1279 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 PA2G4P1-201ENST00000442248 1197 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC007383.1-201ENST00000445875 636 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 CDY20P-201ENST00000447528 1279 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 OR6C72P-201ENST00000451403 892 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC245028.2-201ENST00000458673 253 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC004890.1-201ENST00000461005 181 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 RN7SL273P-201ENST00000481561 299 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 RPS12P31-201ENST00000491419 398 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC023424.1-201ENST00000496058 459 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC040958.1-201ENST00000561102 201 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC002519.2-203ENST00000567043 837 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AC009237.13-201ENST00000603193 276 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AL008729.2-201ENST00000606393 473 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 AL365181.4-201ENST00000609800 547 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 MIR6793-201ENST00000612376 63 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 CUL4AP1-201ENST00000514750 1863 ntBASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CCDC71LQ8N9Z2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC71LQ8N9Z2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms