Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL117692.1-201ENST00000494283 713 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 EIF3LP3-201ENST00000495197 822 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 GTF2IP9-201ENST00000502460 301 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 ASNSP4-201ENST00000511103 447 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC112198.4-201ENST00000515450 351 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 RN7SKP183-201ENST00000517169 324 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC026407.1-201ENST00000518369 204 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 WBP1LP3-201ENST00000523033 208 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC008507.3-201ENST00000585753 472 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC034236.3-201ENST00000605999 461 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 FAM72A-208ENST00000607379 1139 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC048344.4-201ENST00000619744 527 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AL035661.1-201ENST00000620459 1144 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 AC027088.4-201ENST00000611559 1947 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 CASC19-238ENST00000641523 1558 ntBASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLIP4Q8N3C7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC020633.1-201ENST00000468439 2247 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC110792.3-201ENST00000595906 1614 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 CASC19-261ENST00000641853 1638 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 RN7SKP145-201ENST00000363291 303 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 VN1R21P-201ENST00000426703 765 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MRPL50P1-201ENST00000431951 384 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MTCYBP15-201ENST00000433123 1127 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC007679.3-201ENST00000434035 414 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 VN1R110P-201ENST00000438988 971 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AMYP1-201ENST00000440059 1023 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 RPS10P18-201ENST00000442662 495 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC023271.1-201ENST00000445936 1090 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 HMGN1P5-201ENST00000448591 263 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 CLIC4P1-201ENST00000453177 535 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 RN7SL57P-201ENST00000493687 290 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC010468.3-201ENST00000508225 458 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 SETP21-201ENST00000514799 892 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AP003396.4-201ENST00000527574 265 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 PCNAP4-201ENST00000532690 730 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC074029.2-201ENST00000551045 634 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC007956.1-201ENST00000555623 542 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL356801.1-201ENST00000559320 294 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL359091.2-201ENST00000609303 556 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MIR6793-201ENST00000612376 63 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MIR6889-201ENST00000613185 59 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC048341.3-201ENST00000619323 491 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MIR6806-201ENST00000622141 64 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AC097655.1-201ENST00000635075 318 ntBASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLIP4Q8N3C7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP4Q8N3C7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms