Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GSTM1-203ENST00000369819 790 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 RNU6-809P-201ENST00000384461 107 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 COX6CP17-201ENST00000421389 185 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL513185.2-201ENST00000425543 193 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 RPS10P2-201ENST00000430953 494 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL606752.1-201ENST00000435442 666 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 MTND5P14-201ENST00000441481 1267 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 GCNT1P5-201ENST00000449274 682 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC103563.5-201ENST00000455643 364 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC006387.1-203ENST00000494849 342 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SSX8-201ENST00000506270 579 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC093325.1-201ENST00000508378 326 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 RNA5SP422-201ENST00000516778 111 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 PIGFP1-201ENST00000519180 653 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 IGLVIV-59-201ENST00000520218 250 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL359212.1-201ENST00000556608 614 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 MT1L-202ENST00000566367 78 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 MIR544B-201ENST00000582372 78 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC245014.2-201ENST00000603689 287 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC246785.4-201ENST00000605374 287 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AP001521.1-201ENST00000609150 300 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL136967.1-201ENST00000625120 441 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC110994.2-201ENST00000635481 492 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL121936.2-201ENST00000641935 662 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC087045.3-201ENST00000623046 2468 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 HSPA8P17-201ENST00000427029 1382 ntBASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 AC106800.1-201ENST00000501221 1362 ntBASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 OR52B5P-204ENST00000641744 3467 ntBASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 UGT2B25P-201ENST00000511504 1586 ntBASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 AC130360.2-201ENST00000533477 1556 ntBASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.21□□□□□ -1.25
DEPDC4Q8N2C3 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 MIR614-201ENST00000385082 90 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RFKP1-201ENST00000400940 428 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RPSAP42-201ENST00000403415 878 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 CCNYL3-201ENST00000407030 998 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 BX295541.1-201ENST00000417774 250 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 HMGB3P20-201ENST00000417997 600 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 USP9YP20-201ENST00000419224 558 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 ZEB2-AS1-201ENST00000421083 453 ntTSL 2 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AL022100.1-202ENST00000421214 548 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC233981.1-201ENST00000423224 461 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AL954705.1-201ENST00000435277 559 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 ASS1P5-201ENST00000435496 1239 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 SNX18P9-201ENST00000440580 835 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RBMY2TP-201ENST00000451162 947 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RAD23BP3-201ENST00000454157 1152 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 MTCO3P20-201ENST00000454926 688 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms