Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SNORA11.5-201ENST00000408163 128 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 RN7SKP268-201ENST00000411107 316 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 GAPDHP49-201ENST00000421421 961 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL672212.1-201ENST00000422246 400 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 FBP2P1-202ENST00000424473 530 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 RPL5P34-201ENST00000426545 891 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL365400.1-201ENST00000431854 640 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC064862.5-201ENST00000440618 334 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 MRPL50P4-201ENST00000446432 475 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC239367.2-201ENST00000447309 705 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 Y_RNA.632-201ENST00000459189 102 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 MTND1P16-201ENST00000465177 898 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC096741.1-201ENST00000472250 846 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC091982.1-202ENST00000473923 343 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC091959.2-201ENST00000477363 321 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 RN7SL741P-201ENST00000482473 289 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL163540.1-201ENST00000485382 386 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 RN7SL153P-201ENST00000486501 292 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC010587.1-201ENST00000505809 469 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 Y_RNA.720-201ENST00000517166 92 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AP005902.1-201ENST00000521358 186 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 OR5F2P-201ENST00000532761 941 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 PRR13P5-201ENST00000596581 442 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 SUGT1P3-202ENST00000604259 383 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL161729.4-201ENST00000604650 476 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AL136363.1-201ENST00000605349 337 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 CTHRC1P1-201ENST00000605383 469 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC092807.2-201ENST00000609367 243 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 TNFSF15-201ENST00000374044 2789 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 CR383658.2-201ENST00000547576 1525 ntBASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
NPAS3Q8IXF0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC011493.1-201ENST00000596753 1632 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MT-TG-201ENST00000387429 68 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 OR7E101P-201ENST00000400428 513 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MTCO2P33-201ENST00000402100 465 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MTCYBP36-201ENST00000404146 440 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC099535.1-201ENST00000408928 371 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 RPS26P38-201ENST00000414476 348 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MTCO1P45-201ENST00000431457 267 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC245517.2-201ENST00000442890 346 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 Y_RNA.631-201ENST00000459607 101 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC004890.1-201ENST00000461005 181 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 RN7SL372P-201ENST00000461982 298 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 BTG1P1-201ENST00000540396 508 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AL512360.1-201ENST00000555346 234 ntBASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.56□□□□□ -1.2
NPAS3Q8IXF0 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms