Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 AC010886.1-201ENST00000437380 2869 ntBASIC7.74□□□□□ -1.17
RNF135Q8IUD6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RNF135Q8IUD6 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MTND5P23-201ENST00000430812 1655 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC017104.4-201ENST00000636283 1592 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RN7SKP36-201ENST00000363997 312 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 SSX6-201ENST00000376932 562 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RNA5SP122-201ENST00000384457 108 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RNU6-297P-201ENST00000384636 107 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MIR217-201ENST00000384817 110 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RNU6-876P-201ENST00000391295 104 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 FAUP2-201ENST00000394301 401 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 PDCL3P5-201ENST00000398028 722 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MTCYBP36-201ENST00000404146 440 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CCNG1P1-201ENST00000406783 885 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AIMP1P1-201ENST00000418670 937 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AL009174.1-201ENST00000426577 416 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RPL35P8-201ENST00000433284 337 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC093166.3-201ENST00000448785 303 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC009567.2-201ENST00000502989 349 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RNU6-875P-201ENST00000516488 106 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC087276.1-201ENST00000529659 480 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC105275.2-201ENST00000567907 711 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AL096855.2-201ENST00000605785 369 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AL354760.1-201ENST00000608357 643 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC005753.1-201ENST00000623837 618 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AP000648.2-201ENST00000624182 404 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AC131971.1-201ENST00000332881 1482 ntBASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.73□□□□□ -1.17
RNF135Q8IUD6 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms