Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC015802.2-201ENST00000589690 189 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AL355480.1-201ENST00000629041 99 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 MIR4302-201ENST00000638058 60 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 AC087565.3-203ENST00000641018 837 ntBASIC4.84□□□□□ -1.63
LRRC28Q86X40 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC28Q86X40 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
LRRC28Q86X40 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LRRC28Q86X40 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
LRRC28Q86X40 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.84□□□□□ -1.64
LRRC28Q86X40 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LRRC28Q86X40 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.84□□□□□ -1.64
LRRC28Q86X40 AC114947.2-201ENST00000565748 2125 ntBASIC4.84□□□□□ -1.64
LRRC28Q86X40 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 CASC19-248ENST00000641674 1356 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AL512422.1-201ENST00000407033 553 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 RN7SKP293-201ENST00000411389 296 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 OR2AT2P-201ENST00000413438 905 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 NIFKP3-201ENST00000417799 865 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 NAP1L4P2-201ENST00000425958 899 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC017019.1-201ENST00000426129 261 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 RPL5P22-201ENST00000480199 884 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC009120.1-201ENST00000493458 473 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AP006245.2-201ENST00000522004 300 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 HMGB1P42-201ENST00000532126 553 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC127381.1-201ENST00000555979 939 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC010547.6-201ENST00000571789 193 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 DPRXP4-201ENST00000578053 568 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 AC011445.2-201ENST00000599274 173 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 RN7SL787P-201ENST00000613000 284 ntBASIC4.83□□□□□ -1.64
LRRC28Q86X40 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LRRC28Q86X40 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
LRRC28Q86X40 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 MIR323A-201ENST00000362199 86 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 RNA5SP46-201ENST00000362370 120 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 RNU6-249P-201ENST00000363016 102 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 RN7SKP286-201ENST00000410894 299 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 SETP15-201ENST00000412724 337 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL357752.1-201ENST00000412817 349 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 RPL12P9-201ENST00000412942 488 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC002504.1-201ENST00000438281 691 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 SUMO2P3-201ENST00000438311 288 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL391987.1-201ENST00000441025 200 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 GTF3AP5-201ENST00000442645 697 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 CYCSP24-201ENST00000445119 316 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL596266.1-201ENST00000448132 400 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 YWHAEP1-201ENST00000453697 763 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 IGBP1P4-201ENST00000503202 879 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 HMGN1P9-201ENST00000515212 298 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 RNU6-615P-201ENST00000516065 106 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 SNORA43.3-201ENST00000517240 103 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC139365.2-201ENST00000517972 253 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms