Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 HDAC1P1-201ENST00000455482 1445 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AC011447.6-201ENST00000623510 2598 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AC092821.2-201ENST00000545710 2042 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AL445250.1-203ENST00000641829 1535 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 UGT2B25P-201ENST00000511504 1586 ntBASIC7.42□□□□□ -1.22
LYSMD3Q7Z3D4 AC092162.3-201ENST00000624511 1624 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC133552.3-201ENST00000572236 1869 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 Y_RNA.86-201ENST00000363020 111 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 RN7SKP174-201ENST00000363803 330 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 Y_RNA.409-201ENST00000383990 98 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 SNORA75.4-201ENST00000391278 119 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LARP1P1-201ENST00000407692 292 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 RSU1P3-201ENST00000412878 835 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC009413.1-201ENST00000414823 399 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC093698.1-201ENST00000423843 571 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC244505.2-201ENST00000435089 759 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 YWHAQP9-201ENST00000445891 512 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC002486.2-201ENST00000447806 590 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC092421.1-201ENST00000448148 418 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 SNRPGP6-201ENST00000451124 220 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC093166.4-201ENST00000457867 318 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 RN7SL180P-201ENST00000466769 294 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC018475.1-201ENST00000478358 465 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC091544.1-201ENST00000484702 348 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC008040.4-201ENST00000494834 768 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 SSX8-201ENST00000506270 579 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 RNA5SP75-201ENST00000516841 111 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AP005597.2-201ENST00000526238 341 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 OR5AP1P-201ENST00000529730 940 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC068631.3-201ENST00000538831 225 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL512360.1-201ENST00000555346 234 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC025678.1-201ENST00000567861 338 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 MTCO2P22-201ENST00000603246 681 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC091488.1-201ENST00000604239 660 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC010200.2-201ENST00000605098 235 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL031658.2-201ENST00000616850 651 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 uc_338.21-201ENST00000622458 147 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC068880.5-201ENST00000624331 290 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC079228.1-201ENST00000624774 1049 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AC073488.2-201ENST00000631903 751 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 CRYM-AS1-204ENST00000637983 556 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 WNK1-220ENST00000574564 1401 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL133320.1-201ENST00000621423 2352 ntBASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LYSMD3Q7Z3D4 AL139805.2-201ENST00000455305 2433 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms