Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC097063.1-201ENST00000426714 1797 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC068870.3-201ENST00000625077 2536 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 OR56A4-201ENST00000330728 1209 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 RNU6-1257P-201ENST00000384625 110 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 NIFKP3-201ENST00000417799 865 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 GNG5P5-201ENST00000420444 220 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 MGAT2P2-201ENST00000427194 797 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC015983.1-201ENST00000441577 373 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC023141.8-201ENST00000442554 208 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC113367.2-201ENST00000505749 160 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 NACAP5-201ENST00000509863 636 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 GAPDHP62-201ENST00000515313 990 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 RNU2-45P-201ENST00000516068 187 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 CASP1P2-201ENST00000526830 1258 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AP004609.2-201ENST00000532177 190 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL078601.3-201ENST00000573303 535 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AF230666.2-201ENST00000602328 725 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 BMS1P7-201ENST00000602440 1052 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC005899.6-201ENST00000620729 297 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 AL138693.1-201ENST00000622219 129 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC073488.3-201ENST00000631611 778 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 AC099654.8-201ENST00000637757 681 ntBASIC5.19□□□□□ -1.58
SHFQ7M4L6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.19□□□□□ -1.58
SHFQ7M4L6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHFQ7M4L6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AP001029.2-203ENST00000589795 4910 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AC112255.1-201ENST00000624070 2493 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 RNFT1P3-201ENST00000340898 1052 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 OR13C3-201ENST00000374781 1108 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.18□□□□□ -1.58
SHFQ7M4L6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL024507.1-201ENST00000412741 274 ntBASIC5.18□□□□□ -1.58
SHFQ7M4L6 AL158050.1-201ENST00000416077 457 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms