Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AL512422.1-201ENST00000407033 553 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC113412.1-201ENST00000425840 504 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AL513343.1-201ENST00000451818 792 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 OR2AF1P-201ENST00000454899 889 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 TPRKBP1-201ENST00000456243 481 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 RPS27AP2-201ENST00000457576 465 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 RN7SL273P-201ENST00000481561 299 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC009120.1-201ENST00000493458 473 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 FTH1P11-201ENST00000517577 551 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC139365.2-201ENST00000517972 253 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC078899.1-201ENST00000521432 1185 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC138832.1-201ENST00000522871 556 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC025423.2-201ENST00000537570 439 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 SNRPGP1-201ENST00000553864 222 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC096996.1-201ENST00000563813 325 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC010547.7-201ENST00000570323 333 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 MIR4433B-201ENST00000581329 102 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 NANOGP3-201ENST00000605855 286 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 MIR6729-201ENST00000618194 65 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AL139254.3-201ENST00000641097 674 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC114786.1-201ENST00000512892 1415 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AL158152.1-201ENST00000602652 1435 ntBASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CHMP1BQ7LBR1 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 YES1P1-201ENST00000418510 1628 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AP000542.2-201ENST00000623199 6179 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AL589826.1-201ENST00000340697 249 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RNA5SP242-201ENST00000364171 118 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RNU4-2-201ENST00000365668 141 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 GAPDHP42-201ENST00000406848 981 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RPS6P23-201ENST00000413224 722 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 TRIM60P13-201ENST00000432350 1283 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC023141.9-201ENST00000458734 412 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC089999.1-201ENST00000460336 374 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RPS23P6-201ENST00000466136 431 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RN7SL101P-201ENST00000496350 279 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 NPM1P21-201ENST00000513394 762 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC021146.10-201ENST00000515628 706 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RN7SKP99-201ENST00000517028 307 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 GTF2IP11-201ENST00000526931 420 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC023389.2-201ENST00000580031 955 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 RN7SL753P-201ENST00000581238 290 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 MIR6768-201ENST00000610734 72 ntBASIC5.12□□□□□ -1.59
CHMP1BQ7LBR1 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms