Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 OR8Q1P-201ENST00000526467 655 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC008126.1-201ENST00000549019 480 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC126177.5-201ENST00000549599 178 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC009852.2-201ENST00000567898 485 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC027216.1-201ENST00000577726 685 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AL512329.2-201ENST00000607350 548 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC138965.3-201ENST00000623875 498 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 CR382285.2-201ENST00000624662 1495 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AL590763.1-201ENST00000398297 1545 ntBASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
H3F3CQ6NXT2 AC007938.2-201ENST00000604666 2634 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RNA5SP335-201ENST00000363817 110 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RNU6-171P-201ENST00000384354 107 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RN7SKP278-201ENST00000410504 342 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC096921.1-201ENST00000411661 375 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 BRWD1P3-201ENST00000428816 390 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 LYPLA1P1-201ENST00000434514 622 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 RPL5P25-201ENST00000441148 775 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC105399.1-202ENST00000447303 205 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC138832.1-201ENST00000522871 556 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 OR4A43P-201ENST00000532938 908 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 BLZF2P-201ENST00000553776 1130 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AL049779.2-201ENST00000553847 315 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC016180.1-201ENST00000567945 403 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 BX323046.1-201ENST00000610145 535 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC008115.4-201ENST00000619780 775 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.1□□□□□ -1.59
H3F3CQ6NXT2 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AC097063.1-201ENST00000426714 1797 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 HSPD1P7-201ENST00000447985 1686 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AL121886.1-201ENST00000358609 435 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 RNA5SP326-201ENST00000363209 110 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 U3.7-201ENST00000363668 216 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 RPSAP41-201ENST00000439695 860 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 ARAFP2-201ENST00000440565 559 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 RPS26P41-201ENST00000450370 284 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 SNORD125-201ENST00000459538 96 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 RN7SKP99-201ENST00000517028 307 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 CDC42P3-201ENST00000518493 633 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AC060780.2-201ENST00000589047 198 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AC016252.1-201ENST00000609721 474 ntBASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
H3F3CQ6NXT2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
H3F3CQ6NXT2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms