Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC087752.2-201ENST00000521219 281 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 MIR4789-201ENST00000577469 82 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC091805.2-201ENST00000603848 235 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AP001836.1-201ENST00000604675 523 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC005377.1-201ENST00000605126 456 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC009237.15-201ENST00000610252 501 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC008443.7-201ENST00000622195 246 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AL683826.1-201ENST00000624104 627 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 BRD7P1-201ENST00000557705 1915 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 OFD1P8Y-201ENST00000449148 1433 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC097634.1-201ENST00000604491 2467 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AP003175.1-201ENST00000641383 6658 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 RNA5SP232-201ENST00000364144 119 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 RN7SKP130-201ENST00000364924 301 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC026310.1-201ENST00000396004 378 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AL133260.1-201ENST00000405720 405 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 OR6K4P-201ENST00000423179 955 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AHCYP8-201ENST00000425108 209 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 MOB1AP1-201ENST00000430903 535 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 MTND3P21-201ENST00000433774 331 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 LARP1BP3-201ENST00000437229 869 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 RN7SL83P-201ENST00000468131 297 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 RPS3AP49-201ENST00000472161 790 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 RN7SL104P-201ENST00000498686 293 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC093770.1-201ENST00000511559 571 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC133963.2-201ENST00000513686 578 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC093878.1-201ENST00000515630 432 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 OR5AL2P-201ENST00000532185 920 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 OR4A21P-201ENST00000532759 944 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 NXPE2P1-201ENST00000543705 726 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 PPIAP6-201ENST00000557078 499 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC023827.2-201ENST00000566880 1061 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 PPIAP14-201ENST00000577627 496 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 MIR3154-201ENST00000577829 84 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC044792.1-201ENST00000593294 196 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 WISP1-OT1-201ENST00000602893 642 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AL035410.2-201ENST00000604963 864 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 NDUFA8P1-201ENST00000605525 367 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC090970.3-201ENST00000612566 866 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 AC090517.2-201ENST00000614966 680 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 MRPL57P3-201ENST00000619218 176 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 AL354702.2-202ENST00000641481 890 ntBASIC7.1□□□□□ -1.27
RNF43Q68DV7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RNF43Q68DV7 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms